Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RTCBQ9Y3I0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 AC106730.1-201ENST00000566722 1090 ntBASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTCBQ9Y3I0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 AC112907.3-201ENST00000577781 2400 ntBASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RTCBQ9Y3I0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 POLD2P1-201ENST00000511220 997 ntBASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 PWWP2AP1-201ENST00000429776 2273 ntBASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 AC243591.1-201ENST00000452967 1364 ntBASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
RTCBQ9Y3I0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RTCBQ9Y3I0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.49■■□□□ 1.35
RTCBQ9Y3I0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC23.49■■□□□ 1.35
RTCBQ9Y3I0 MIR1233-2-201ENST00000408138 82 ntBASIC23.49■■□□□ 1.35
RTCBQ9Y3I0 MIR1233-1-201ENST00000408722 82 ntBASIC23.49■■□□□ 1.35
RTCBQ9Y3I0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC23.49■■□□□ 1.35
RTCBQ9Y3I0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
RTCBQ9Y3I0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC23.49■■□□□ 1.35
RTCBQ9Y3I0 AC008608.2-201ENST00000606089 416 ntBASIC23.49■■□□□ 1.35
RTCBQ9Y3I0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RTCBQ9Y3I0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RTCBQ9Y3I0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
RTCBQ9Y3I0 TREX1-205ENST00000625293 1783 ntBASIC23.49■■□□□ 1.35
RTCBQ9Y3I0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.49■■□□□ 1.35
RTCBQ9Y3I0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RTCBQ9Y3I0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 AC096582.2-201ENST00000510860 516 ntBASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 AC114341.1-201ENST00000618070 349 ntBASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.48■■□□□ 1.35
RTCBQ9Y3I0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
RTCBQ9Y3I0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms