Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
UBQLN1Q9UMX0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 HBZP1-201ENST00000354915 429 ntBASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 FAM86EP-206ENST00000510506 987 ntBASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 KRT18P41-201ENST00000518924 1277 ntBASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBQLN1Q9UMX0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 AL136038.3-201ENST00000561909 1096 ntBASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 AC091076.1-201ENST00000610741 619 ntBASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 AL358472.4-201ENST00000633140 710 ntBASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBQLN1Q9UMX0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBQLN1Q9UMX0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBQLN1Q9UMX0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBQLN1Q9UMX0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.02■□□□□ 0.79
UBQLN1Q9UMX0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
UBQLN1Q9UMX0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 AC092597.1-201ENST00000487352 616 ntBASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBQLN1Q9UMX0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBQLN1Q9UMX0 AP000593.1-201ENST00000393668 712 ntBASIC20■□□□□ 0.79
UBQLN1Q9UMX0 PCED1CP-201ENST00000419887 785 ntBASIC20■□□□□ 0.79
UBQLN1Q9UMX0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms