Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 KRT8P32-201ENST00000512863 1461 ntBASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDC42SE2Q9NRR3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 OR6D1P-202ENST00000641007 5290 ntBASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 Z85996.1-201ENST00000494644 937 ntBASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 UNC93B5-201ENST00000530315 699 ntBASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 GXYLT1P5-201ENST00000614548 1189 ntBASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 AL109923.1-201ENST00000618799 583 ntBASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 HR-201ENST00000312841 5351 ntTSL 5 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 KRT8P3-201ENST00000519669 1449 ntBASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC12.88□□□□□ -0.35
CDC42SE2Q9NRR3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 AC067852.2-201ENST00000590513 2313 ntBASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CDC42SE2Q9NRR3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms