Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 REXO1L9P-201ENST00000604264 2108 ntBASIC20.88■□□□□ 0.93
CBX8Q9HC52 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.88■□□□□ 0.93
CBX8Q9HC52 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.88■□□□□ 0.93
CBX8Q9HC52 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.88■□□□□ 0.93
CBX8Q9HC52 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX8Q9HC52 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CBX8Q9HC52 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.88■□□□□ 0.93
CBX8Q9HC52 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CBX8Q9HC52 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CBX8Q9HC52 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX8Q9HC52 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX8Q9HC52 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX8Q9HC52 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CBX8Q9HC52 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.87■□□□□ 0.93
CBX8Q9HC52 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CBX8Q9HC52 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CBX8Q9HC52 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CBX8Q9HC52 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CBX8Q9HC52 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX8Q9HC52 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CBX8Q9HC52 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX8Q9HC52 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CBX8Q9HC52 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.87■□□□□ 0.93
CBX8Q9HC52 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CBX8Q9HC52 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.87■□□□□ 0.93
CBX8Q9HC52 C1QL1P1-201ENST00000568105 661 ntBASIC20.87■□□□□ 0.93
CBX8Q9HC52 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.87■□□□□ 0.93
CBX8Q9HC52 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CBX8Q9HC52 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CBX8Q9HC52 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX8Q9HC52 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CBX8Q9HC52 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX8Q9HC52 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CBX8Q9HC52 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CBX8Q9HC52 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.87■□□□□ 0.93
CBX8Q9HC52 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.87■□□□□ 0.93
CBX8Q9HC52 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.87■□□□□ 0.93
CBX8Q9HC52 KRT8P45-201ENST00000414328 1447 ntBASIC20.87■□□□□ 0.93
CBX8Q9HC52 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.87■□□□□ 0.93
CBX8Q9HC52 AC112777.1-201ENST00000540175 1423 ntBASIC20.87■□□□□ 0.93
CBX8Q9HC52 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
CBX8Q9HC52 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CBX8Q9HC52 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CBX8Q9HC52 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX8Q9HC52 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX8Q9HC52 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX8Q9HC52 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX8Q9HC52 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CBX8Q9HC52 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CBX8Q9HC52 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.86■□□□□ 0.93
CBX8Q9HC52 GUSBP6-202ENST00000438529 1198 ntBASIC20.86■□□□□ 0.93
CBX8Q9HC52 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.86■□□□□ 0.93
CBX8Q9HC52 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CBX8Q9HC52 AL121832.2-201ENST00000610979 668 ntBASIC20.86■□□□□ 0.93
CBX8Q9HC52 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.86■□□□□ 0.93
CBX8Q9HC52 AC008556.1-201ENST00000610908 2040 ntBASIC20.86■□□□□ 0.93
CBX8Q9HC52 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX8Q9HC52 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX8Q9HC52 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CBX8Q9HC52 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CBX8Q9HC52 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX8Q9HC52 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CBX8Q9HC52 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CBX8Q9HC52 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CBX8Q9HC52 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX8Q9HC52 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX8Q9HC52 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.85■□□□□ 0.93
CBX8Q9HC52 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CBX8Q9HC52 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX8Q9HC52 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CBX8Q9HC52 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX8Q9HC52 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CBX8Q9HC52 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX8Q9HC52 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CBX8Q9HC52 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX8Q9HC52 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX8Q9HC52 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX8Q9HC52 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX8Q9HC52 POU5F1P3-201ENST00000428824 1078 ntBASIC20.85■□□□□ 0.93
CBX8Q9HC52 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX8Q9HC52 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.85■□□□□ 0.93
CBX8Q9HC52 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.85■□□□□ 0.93
CBX8Q9HC52 AC097658.1-201ENST00000475555 843 ntBASIC20.85■□□□□ 0.93
CBX8Q9HC52 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.85■□□□□ 0.93
CBX8Q9HC52 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.85■□□□□ 0.93
CBX8Q9HC52 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.85■□□□□ 0.93
CBX8Q9HC52 MYC-208ENST00000641036 567 ntBASIC20.85■□□□□ 0.93
CBX8Q9HC52 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.85■□□□□ 0.93
CBX8Q9HC52 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CBX8Q9HC52 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.85■□□□□ 0.93
CBX8Q9HC52 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.85■□□□□ 0.93
CBX8Q9HC52 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CBX8Q9HC52 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.85■□□□□ 0.93
CBX8Q9HC52 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CBX8Q9HC52 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CBX8Q9HC52 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CBX8Q9HC52 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CBX8Q9HC52 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.84■□□□□ 0.93
CBX8Q9HC52 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.84■□□□□ 0.93
CBX8Q9HC52 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms