Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 AC006333.2-201ENST00000607957 2099 ntBASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
BCAS3Q9H6U6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 AC034232.1-201ENST00000506026 1064 ntBASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BCAS3Q9H6U6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 AL391807.1-203ENST00000604392 2365 ntBASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 AL645929.1-201ENST00000420084 975 ntBASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 HLA-F-220ENST00000434407 884 ntBASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.97■□□□□ 0.95
BCAS3Q9H6U6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 AC099343.3-201ENST00000605834 2503 ntBASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 AC104390.1-201ENST00000555663 520 ntBASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 AC069148.1-201ENST00000608741 768 ntBASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.96■□□□□ 0.95
BCAS3Q9H6U6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms