Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRPM4Q8TD43 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC22.09■■□□□ 1.13
TRPM4Q8TD43 ZNF259P1-201ENST00000407656 1365 ntBASIC22.09■■□□□ 1.13
TRPM4Q8TD43 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRPM4Q8TD43 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
TRPM4Q8TD43 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TRPM4Q8TD43 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC22.09■■□□□ 1.13
TRPM4Q8TD43 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
TRPM4Q8TD43 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
TRPM4Q8TD43 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TRPM4Q8TD43 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TRPM4Q8TD43 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
TRPM4Q8TD43 THAP5-204ENST00000438865 868 ntTSL 2 BASIC22.08■■□□□ 1.13
TRPM4Q8TD43 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TRPM4Q8TD43 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC22.08■■□□□ 1.13
TRPM4Q8TD43 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC22.08■■□□□ 1.13
TRPM4Q8TD43 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC22.08■■□□□ 1.13
TRPM4Q8TD43 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
TRPM4Q8TD43 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
TRPM4Q8TD43 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.12
TRPM4Q8TD43 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 HES2-202ENST00000377836 507 ntTSL 2 BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TRPM4Q8TD43 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 AC112907.3-201ENST00000577781 2400 ntBASIC22.06■■□□□ 1.12
TRPM4Q8TD43 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 RCN1P2-201ENST00000398357 915 ntBASIC22.06■■□□□ 1.12
TRPM4Q8TD43 HIST2H3DP1-201ENST00000401004 416 ntBASIC22.06■■□□□ 1.12
TRPM4Q8TD43 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TRPM4Q8TD43 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.05■■□□□ 1.12
TRPM4Q8TD43 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC22.05■■□□□ 1.12
TRPM4Q8TD43 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRPM4Q8TD43 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRPM4Q8TD43 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRPM4Q8TD43 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.04■■□□□ 1.12
TRPM4Q8TD43 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRPM4Q8TD43 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC22.04■■□□□ 1.12
TRPM4Q8TD43 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRPM4Q8TD43 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRPM4Q8TD43 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
TRPM4Q8TD43 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRPM4Q8TD43 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TRPM4Q8TD43 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRPM4Q8TD43 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TRPM4Q8TD43 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRPM4Q8TD43 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms