Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF135Q8IUD6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 MRPL3P1-201ENST00000400109 1033 ntBASIC19.77■□□□□ 0.76
RNF135Q8IUD6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
RNF135Q8IUD6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.77■□□□□ 0.75
RNF135Q8IUD6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF135Q8IUD6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF135Q8IUD6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF135Q8IUD6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF135Q8IUD6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 KRT18P31-201ENST00000506277 1292 ntBASIC19.76■□□□□ 0.75
RNF135Q8IUD6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 FOSL1P1-201ENST00000511041 816 ntBASIC19.76■□□□□ 0.75
RNF135Q8IUD6 AP000867.3-201ENST00000524675 377 ntBASIC19.76■□□□□ 0.75
RNF135Q8IUD6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 BX640515.1-201ENST00000617215 977 ntBASIC19.76■□□□□ 0.75
RNF135Q8IUD6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 AC120498.9-201ENST00000339021 3867 ntBASIC19.76■□□□□ 0.75
RNF135Q8IUD6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF135Q8IUD6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF135Q8IUD6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF135Q8IUD6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF135Q8IUD6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
RNF135Q8IUD6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF135Q8IUD6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF135Q8IUD6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF135Q8IUD6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RNF135Q8IUD6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF135Q8IUD6 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF135Q8IUD6 MIR4674-201ENST00000582457 87 ntBASIC19.75■□□□□ 0.75
RNF135Q8IUD6 AC116562.4-201ENST00000641316 2276 ntBASIC19.75■□□□□ 0.75
RNF135Q8IUD6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF135Q8IUD6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF135Q8IUD6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF135Q8IUD6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF135Q8IUD6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms