Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS13CQ709C8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS13CQ709C8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS13CQ709C8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
VPS13CQ709C8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 AC005104.2-201ENST00000427818 678 ntBASIC15.55■□□□□ 0.08
VPS13CQ709C8 HNRNPDP1-201ENST00000439535 754 ntBASIC15.55■□□□□ 0.08
VPS13CQ709C8 AC018712.1-201ENST00000455767 687 ntBASIC15.55■□□□□ 0.08
VPS13CQ709C8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.55■□□□□ 0.08
VPS13CQ709C8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.55■□□□□ 0.08
VPS13CQ709C8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.55■□□□□ 0.08
VPS13CQ709C8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
VPS13CQ709C8 PMS2P7-201ENST00000506558 1336 ntBASIC15.55■□□□□ 0.08
VPS13CQ709C8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.55■□□□□ 0.08
VPS13CQ709C8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.55■□□□□ 0.08
VPS13CQ709C8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
VPS13CQ709C8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.55■□□□□ 0.08
VPS13CQ709C8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.55■□□□□ 0.08
VPS13CQ709C8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 AL158211.5-201ENST00000623583 2518 ntBASIC15.55■□□□□ 0.08
VPS13CQ709C8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
VPS13CQ709C8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.55■□□□□ 0.08
VPS13CQ709C8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.55■□□□□ 0.08
VPS13CQ709C8 MIR3180-5-201ENST00000583743 153 ntBASIC15.55■□□□□ 0.08
VPS13CQ709C8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
VPS13CQ709C8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.55■□□□□ 0.08
VPS13CQ709C8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.55■□□□□ 0.08
VPS13CQ709C8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.55■□□□□ 0.08
VPS13CQ709C8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13CQ709C8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 MIR564-202ENST00000385049 94 ntBASIC15.54■□□□□ 0.08
VPS13CQ709C8 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 AL139424.1-201ENST00000607572 797 ntBASIC15.54■□□□□ 0.08
VPS13CQ709C8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 AC112497.1-201ENST00000624824 639 ntBASIC15.54■□□□□ 0.08
VPS13CQ709C8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.54■□□□□ 0.08
VPS13CQ709C8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13CQ709C8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS13CQ709C8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.53■□□□□ 0.08
VPS13CQ709C8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS13CQ709C8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS13CQ709C8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS13CQ709C8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
VPS13CQ709C8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.53■□□□□ 0.08
VPS13CQ709C8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS13CQ709C8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS13CQ709C8 TERC-201ENST00000602385 541 ntBASIC15.53■□□□□ 0.08
VPS13CQ709C8 AC124864.1-201ENST00000623408 392 ntBASIC15.53■□□□□ 0.08
VPS13CQ709C8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms