Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNKSR3Q6P9H4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNKSR3Q6P9H4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 AL591684.3-201ENST00000605187 298 ntBASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 AC139530.3-201ENST00000620344 690 ntBASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNKSR3Q6P9H4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 KRT18P67-201ENST00000432816 1264 ntBASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 BNIP3P18-201ENST00000593976 575 ntBASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
CNKSR3Q6P9H4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 KRT18P13-201ENST00000400056 1290 ntBASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 AL031284.1-201ENST00000419297 478 ntBASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CNKSR3Q6P9H4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 AF186996.4-201ENST00000467186 377 ntBASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 MIR5100-201ENST00000579544 119 ntBASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 FP475955.4-201ENST00000623131 1990 ntBASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CNKSR3Q6P9H4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.03■□□□□ 0.8
CNKSR3Q6P9H4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms