Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 MIR658-201ENST00000385210 100 ntBASIC10.18□□□□□ -0.78
UBR4Q5T4S7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 AP000867.4-201ENST00000641616 219 ntBASIC10.18□□□□□ -0.78
UBR4Q5T4S7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 LBH-202ENST00000401506 485 ntTSL 3 BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
UBR4Q5T4S7 AC010503.4-201ENST00000615487 688 ntBASIC10.18□□□□□ -0.78
UBR4Q5T4S7 MIR2861-201ENST00000636310 90 ntBASIC10.18□□□□□ -0.78
UBR4Q5T4S7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 AC020928.2-201ENST00000588717 2197 ntBASIC10.17□□□□□ -0.78
UBR4Q5T4S7 CU639417.3-201ENST00000624240 1404 ntBASIC10.17□□□□□ -0.78
UBR4Q5T4S7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 INTS4P1-201ENST00000438455 1935 ntBASIC10.17□□□□□ -0.78
UBR4Q5T4S7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 DPP3P2-201ENST00000416030 1696 ntBASIC10.17□□□□□ -0.78
UBR4Q5T4S7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 RHOQP1-201ENST00000555758 579 ntBASIC10.17□□□□□ -0.78
UBR4Q5T4S7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 RCN1P2-201ENST00000398357 915 ntBASIC10.17□□□□□ -0.78
UBR4Q5T4S7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 VENTXP7-201ENST00000475503 772 ntBASIC10.17□□□□□ -0.78
UBR4Q5T4S7 SERBP1P5-201ENST00000510079 1181 ntBASIC10.17□□□□□ -0.78
UBR4Q5T4S7 AC025678.2-201ENST00000562061 970 ntBASIC10.17□□□□□ -0.78
UBR4Q5T4S7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC10.17□□□□□ -0.78
UBR4Q5T4S7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 AC010240.3-201ENST00000607688 395 ntBASIC10.16□□□□□ -0.78
UBR4Q5T4S7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 IGHGP-201ENST00000390555 1178 ntBASIC10.16□□□□□ -0.78
UBR4Q5T4S7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC10.16□□□□□ -0.78
UBR4Q5T4S7 MIR663B-201ENST00000408361 115 ntBASIC10.16□□□□□ -0.78
UBR4Q5T4S7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms