Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 RPS2P1-201ENST00000434010 821 ntBASIC30.48■■■□□ 2.47
SNAPC4Q5SXM2 DNAJB3-201ENST00000446806 729 ntBASIC30.48■■■□□ 2.47
SNAPC4Q5SXM2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC30.48■■■□□ 2.47
SNAPC4Q5SXM2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SNAPC4Q5SXM2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
SNAPC4Q5SXM2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SNAPC4Q5SXM2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SNAPC4Q5SXM2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC30.48■■■□□ 2.47
SNAPC4Q5SXM2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SNAPC4Q5SXM2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC30.46■■■□□ 2.47
SNAPC4Q5SXM2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SNAPC4Q5SXM2 KRT18P3-201ENST00000451602 1288 ntBASIC30.46■■■□□ 2.47
SNAPC4Q5SXM2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC30.46■■■□□ 2.47
SNAPC4Q5SXM2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC30.46■■■□□ 2.47
SNAPC4Q5SXM2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
SNAPC4Q5SXM2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SNAPC4Q5SXM2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC30.46■■■□□ 2.47
SNAPC4Q5SXM2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC30.46■■■□□ 2.47
SNAPC4Q5SXM2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
SNAPC4Q5SXM2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SNAPC4Q5SXM2 AC092910.1-201ENST00000482027 1129 ntBASIC30.45■■■□□ 2.47
SNAPC4Q5SXM2 RNA5SP415-201ENST00000517246 115 ntBASIC30.45■■■□□ 2.47
SNAPC4Q5SXM2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SNAPC4Q5SXM2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
SNAPC4Q5SXM2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
SNAPC4Q5SXM2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.46
SNAPC4Q5SXM2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
SNAPC4Q5SXM2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
SNAPC4Q5SXM2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 AC004832.2-201ENST00000426397 482 ntBASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 KRT8P32-201ENST00000512863 1461 ntBASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 TP73-AS1-210ENST00000637775 1455 ntBASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 TEX21P-204ENST00000641479 1693 ntBASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 HS6ST1P1-201ENST00000481504 1234 ntBASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
SNAPC4Q5SXM2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 AL391422.3-201ENST00000603791 2761 ntBASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 GABARAPL3-202ENST00000624044 1851 ntBASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 DDT-206ENST00000430101 573 ntTSL 2 BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 AC025062.2-201ENST00000605477 670 ntBASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 AC112777.1-201ENST00000540175 1423 ntBASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
SNAPC4Q5SXM2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
SNAPC4Q5SXM2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC30.42■■■□□ 2.46
SNAPC4Q5SXM2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
SNAPC4Q5SXM2 RPS2P28-201ENST00000314255 741 ntBASIC30.42■■■□□ 2.46
SNAPC4Q5SXM2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SNAPC4Q5SXM2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SNAPC4Q5SXM2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
SNAPC4Q5SXM2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC30.42■■■□□ 2.46
SNAPC4Q5SXM2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
SNAPC4Q5SXM2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC30.42■■■□□ 2.46
SNAPC4Q5SXM2 AP006288.1-201ENST00000446065 395 ntBASIC30.42■■■□□ 2.46
SNAPC4Q5SXM2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SNAPC4Q5SXM2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SNAPC4Q5SXM2 MIR3197-201ENST00000582241 73 ntBASIC30.42■■■□□ 2.46
SNAPC4Q5SXM2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
SNAPC4Q5SXM2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC30.42■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms