Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.64■□□□□ 0.73
USP46P62068 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP46P62068 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
USP46P62068 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP46P62068 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.64■□□□□ 0.73
USP46P62068 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP46P62068 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP46P62068 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP46P62068 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.63■□□□□ 0.73
USP46P62068 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP46P62068 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP46P62068 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP46P62068 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP46P62068 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.63■□□□□ 0.73
USP46P62068 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
USP46P62068 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP46P62068 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP46P62068 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.63■□□□□ 0.73
USP46P62068 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP46P62068 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.63■□□□□ 0.73
USP46P62068 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.63■□□□□ 0.73
USP46P62068 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP46P62068 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.63■□□□□ 0.73
USP46P62068 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.63■□□□□ 0.73
USP46P62068 RASA4DP-201ENST00000460726 1199 ntBASIC19.63■□□□□ 0.73
USP46P62068 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP46P62068 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP46P62068 AL121956.5-201ENST00000625261 221 ntBASIC19.63■□□□□ 0.73
USP46P62068 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.63■□□□□ 0.73
USP46P62068 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP46P62068 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP46P62068 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP46P62068 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
USP46P62068 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP46P62068 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
USP46P62068 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP46P62068 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP46P62068 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP46P62068 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP46P62068 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP46P62068 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP46P62068 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.62■□□□□ 0.73
USP46P62068 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP46P62068 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.62■□□□□ 0.73
USP46P62068 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.62■□□□□ 0.73
USP46P62068 AC092597.1-201ENST00000487352 616 ntBASIC19.62■□□□□ 0.73
USP46P62068 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP46P62068 AC112497.1-201ENST00000624824 639 ntBASIC19.62■□□□□ 0.73
USP46P62068 AC068587.9-201ENST00000641814 219 ntBASIC19.62■□□□□ 0.73
USP46P62068 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP46P62068 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
USP46P62068 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
USP46P62068 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.62■□□□□ 0.73
USP46P62068 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP46P62068 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP46P62068 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP46P62068 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP46P62068 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.62■□□□□ 0.73
USP46P62068 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
USP46P62068 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.62■□□□□ 0.73
USP46P62068 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
USP46P62068 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.61■□□□□ 0.73
USP46P62068 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
USP46P62068 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 MIR564-202ENST00000385049 94 ntBASIC19.61■□□□□ 0.73
USP46P62068 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.61■□□□□ 0.73
USP46P62068 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.61■□□□□ 0.73
USP46P62068 SPDYE13P-201ENST00000445314 798 ntBASIC19.61■□□□□ 0.73
USP46P62068 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.61■□□□□ 0.73
USP46P62068 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.61■□□□□ 0.73
USP46P62068 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.61■□□□□ 0.73
USP46P62068 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
USP46P62068 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.61■□□□□ 0.73
USP46P62068 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
USP46P62068 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
USP46P62068 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
USP46P62068 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP46P62068 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP46P62068 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP46P62068 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
USP46P62068 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.6■□□□□ 0.73
USP46P62068 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
USP46P62068 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms