Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCN1P35523 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CLCN1P35523 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCN1P35523 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCN1P35523 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCN1P35523 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CLCN1P35523 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.25■□□□□ 0.99
CLCN1P35523 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCN1P35523 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.25■□□□□ 0.99
CLCN1P35523 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.25■□□□□ 0.99
CLCN1P35523 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC21.25■□□□□ 0.99
CLCN1P35523 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CLCN1P35523 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.25■□□□□ 0.99
CLCN1P35523 AL138781.1-201ENST00000566567 1274 ntBASIC21.25■□□□□ 0.99
CLCN1P35523 ANO7L1-203ENST00000602586 1720 ntBASIC21.25■□□□□ 0.99
CLCN1P35523 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLCN1P35523 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CLCN1P35523 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCN1P35523 AC090340.1-201ENST00000620778 4980 ntBASIC21.25■□□□□ 0.99
CLCN1P35523 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCN1P35523 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CLCN1P35523 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCN1P35523 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCN1P35523 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCN1P35523 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCN1P35523 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN1P35523 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN1P35523 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
CLCN1P35523 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN1P35523 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.24■□□□□ 0.99
CLCN1P35523 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.24■□□□□ 0.99
CLCN1P35523 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CLCN1P35523 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN1P35523 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CLCN1P35523 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.24■□□□□ 0.99
CLCN1P35523 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CLCN1P35523 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.24■□□□□ 0.99
CLCN1P35523 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.24■□□□□ 0.99
CLCN1P35523 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.24■□□□□ 0.99
CLCN1P35523 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.24■□□□□ 0.99
CLCN1P35523 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.24■□□□□ 0.99
CLCN1P35523 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN1P35523 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN1P35523 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.24■□□□□ 0.99
CLCN1P35523 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CLCN1P35523 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.24■□□□□ 0.99
CLCN1P35523 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN1P35523 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN1P35523 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN1P35523 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN1P35523 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.24■□□□□ 0.99
CLCN1P35523 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.24■□□□□ 0.99
CLCN1P35523 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN1P35523 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CLCN1P35523 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.24■□□□□ 0.99
CLCN1P35523 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CLCN1P35523 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC21.24■□□□□ 0.99
CLCN1P35523 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN1P35523 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.23■□□□□ 0.99
CLCN1P35523 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN1P35523 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.23■□□□□ 0.99
CLCN1P35523 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN1P35523 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
CLCN1P35523 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC21.23■□□□□ 0.99
CLCN1P35523 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.23■□□□□ 0.99
CLCN1P35523 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.23■□□□□ 0.99
CLCN1P35523 AC098934.4-201ENST00000564127 592 ntBASIC21.23■□□□□ 0.99
CLCN1P35523 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.23■□□□□ 0.99
CLCN1P35523 MIR4758-201ENST00000577688 71 ntBASIC21.23■□□□□ 0.99
CLCN1P35523 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.23■□□□□ 0.99
CLCN1P35523 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.23■□□□□ 0.99
CLCN1P35523 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
CLCN1P35523 MYC-209ENST00000641252 345 ntBASIC21.23■□□□□ 0.99
CLCN1P35523 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN1P35523 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN1P35523 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN1P35523 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.23■□□□□ 0.99
CLCN1P35523 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CLCN1P35523 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN1P35523 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN1P35523 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN1P35523 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.23■□□□□ 0.99
CLCN1P35523 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN1P35523 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.23■□□□□ 0.99
CLCN1P35523 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.22■□□□□ 0.99
CLCN1P35523 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CLCN1P35523 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
CLCN1P35523 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.22■□□□□ 0.99
CLCN1P35523 SLC25A6P5-201ENST00000435663 894 ntBASIC21.22■□□□□ 0.99
CLCN1P35523 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN1P35523 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.22■□□□□ 0.99
CLCN1P35523 AL109923.1-201ENST00000618799 583 ntBASIC21.22■□□□□ 0.99
CLCN1P35523 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms