Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL5A2P05997 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL5A2P05997 HNRNPDP1-201ENST00000439535 754 ntBASIC24.56■■□□□ 1.52
COL5A2P05997 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC24.56■■□□□ 1.52
COL5A2P05997 AC093909.1-201ENST00000504731 1122 ntBASIC24.56■■□□□ 1.52
COL5A2P05997 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
COL5A2P05997 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
COL5A2P05997 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC24.56■■□□□ 1.52
COL5A2P05997 TERC-201ENST00000602385 541 ntBASIC24.56■■□□□ 1.52
COL5A2P05997 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
COL5A2P05997 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
COL5A2P05997 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
COL5A2P05997 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
COL5A2P05997 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL5A2P05997 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL5A2P05997 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
COL5A2P05997 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL5A2P05997 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
COL5A2P05997 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
COL5A2P05997 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
COL5A2P05997 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC24.55■■□□□ 1.52
COL5A2P05997 PRKN-208ENST00000610470 531 ntTSL 2 BASIC24.55■■□□□ 1.52
COL5A2P05997 PRKN-209ENST00000612485 225 ntTSL 5 BASIC24.55■■□□□ 1.52
COL5A2P05997 AL357033.4-201ENST00000617703 1807 ntBASIC24.55■■□□□ 1.52
COL5A2P05997 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC24.55■■□□□ 1.52
COL5A2P05997 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.55■■□□□ 1.52
COL5A2P05997 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
COL5A2P05997 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
COL5A2P05997 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL5A2P05997 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL5A2P05997 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC24.54■■□□□ 1.52
COL5A2P05997 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL5A2P05997 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL5A2P05997 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL5A2P05997 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC24.54■■□□□ 1.52
COL5A2P05997 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL5A2P05997 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL5A2P05997 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL5A2P05997 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
COL5A2P05997 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC24.54■■□□□ 1.52
COL5A2P05997 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL5A2P05997 DDT-203ENST00000403754 569 ntTSL 3 BASIC24.54■■□□□ 1.52
COL5A2P05997 DDT-206ENST00000430101 573 ntTSL 2 BASIC24.54■■□□□ 1.52
COL5A2P05997 RPL13AP23-201ENST00000480739 586 ntBASIC24.54■■□□□ 1.52
COL5A2P05997 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC24.54■■□□□ 1.52
COL5A2P05997 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC24.54■■□□□ 1.52
COL5A2P05997 LINC01521-201ENST00000504184 1943 ntBASIC24.54■■□□□ 1.52
COL5A2P05997 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL5A2P05997 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC24.54■■□□□ 1.52
COL5A2P05997 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL5A2P05997 AC112907.3-201ENST00000577781 2400 ntBASIC24.54■■□□□ 1.52
COL5A2P05997 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL5A2P05997 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC24.54■■□□□ 1.52
COL5A2P05997 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC24.54■■□□□ 1.52
COL5A2P05997 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL5A2P05997 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
COL5A2P05997 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC24.54■■□□□ 1.52
COL5A2P05997 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
COL5A2P05997 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC24.53■■□□□ 1.52
COL5A2P05997 THAP5-204ENST00000438865 868 ntTSL 2 BASIC24.53■■□□□ 1.52
COL5A2P05997 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC24.53■■□□□ 1.52
COL5A2P05997 AC145285.3-201ENST00000564603 959 ntBASIC24.53■■□□□ 1.52
COL5A2P05997 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC24.53■■□□□ 1.52
COL5A2P05997 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL5A2P05997 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
COL5A2P05997 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
COL5A2P05997 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL5A2P05997 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL5A2P05997 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
COL5A2P05997 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
COL5A2P05997 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
COL5A2P05997 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
COL5A2P05997 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL5A2P05997 HIST2H3DP1-201ENST00000401004 416 ntBASIC24.52■■□□□ 1.52
COL5A2P05997 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC24.52■■□□□ 1.52
COL5A2P05997 SCARNA2-201ENST00000458748 420 ntBASIC24.52■■□□□ 1.52
COL5A2P05997 PAM16-208ENST00000573553 722 ntTSL 2 BASIC24.52■■□□□ 1.52
COL5A2P05997 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC24.52■■□□□ 1.52
COL5A2P05997 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC24.52■■□□□ 1.52
COL5A2P05997 AP001269.4-201ENST00000609611 512 ntBASIC24.52■■□□□ 1.52
COL5A2P05997 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC24.52■■□□□ 1.52
COL5A2P05997 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
COL5A2P05997 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC24.52■■□□□ 1.52
COL5A2P05997 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL5A2P05997 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC24.52■■□□□ 1.52
COL5A2P05997 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC24.52■■□□□ 1.52
COL5A2P05997 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC24.52■■□□□ 1.52
COL5A2P05997 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.52■■□□□ 1.52
COL5A2P05997 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.52■■□□□ 1.52
COL5A2P05997 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
COL5A2P05997 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC24.52■■□□□ 1.52
COL5A2P05997 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC24.52■■□□□ 1.51
COL5A2P05997 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL5A2P05997 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL5A2P05997 RBM17P3-201ENST00000417687 1192 ntBASIC24.51■■□□□ 1.51
COL5A2P05997 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC24.51■■□□□ 1.51
COL5A2P05997 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC24.51■■□□□ 1.51
COL5A2P05997 AC132008.2-207ENST00000454517 770 ntBASIC24.51■■□□□ 1.51
COL5A2P05997 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC24.51■■□□□ 1.51
COL5A2P05997 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms