Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 NAPSB-206ENST00000562112 1266 ntBASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 AC145285.6-201ENST00000604632 637 ntBASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 AC092865.7-201ENST00000641832 219 ntBASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 LINC01568-207ENST00000641790 1380 ntBASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SPDYE4A6NLX3 AL139384.1-201ENST00000612143 3047 ntBASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 AC008894.3-201ENST00000624324 3103 ntBASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 KRT8P20-201ENST00000423953 1409 ntBASIC21.04■□□□□ 0.96
SPDYE4A6NLX3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 AC067852.2-201ENST00000590513 2313 ntBASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPDYE4A6NLX3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.02■□□□□ 0.96
SPDYE4A6NLX3 AC005521.1-201ENST00000393351 872 ntBASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms