Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
HFM1A2PYH4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
HFM1A2PYH4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
HFM1A2PYH4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
HFM1A2PYH4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
HFM1A2PYH4 MIR149-201ENST00000384879 89 ntBASIC27.59■■■□□ 2.01
HFM1A2PYH4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
HFM1A2PYH4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC27.59■■■□□ 2.01
HFM1A2PYH4 AC009065.1-201ENST00000564055 1225 ntBASIC27.59■■■□□ 2.01
HFM1A2PYH4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC27.59■■■□□ 2.01
HFM1A2PYH4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
HFM1A2PYH4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
HFM1A2PYH4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC27.59■■■□□ 2.01
HFM1A2PYH4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC27.59■■■□□ 2.01
HFM1A2PYH4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC27.59■■■□□ 2.01
HFM1A2PYH4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
HFM1A2PYH4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC27.59■■■□□ 2.01
HFM1A2PYH4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
HFM1A2PYH4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
HFM1A2PYH4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
HFM1A2PYH4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
HFM1A2PYH4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
HFM1A2PYH4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC27.58■■■□□ 2.01
HFM1A2PYH4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC27.58■■■□□ 2.01
HFM1A2PYH4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
HFM1A2PYH4 NMU-205ENST00000511469 756 ntTSL 3 BASIC27.58■■■□□ 2.01
HFM1A2PYH4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC27.58■■■□□ 2.01
HFM1A2PYH4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC27.58■■■□□ 2.01
HFM1A2PYH4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
HFM1A2PYH4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
HFM1A2PYH4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
HFM1A2PYH4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC27.58■■■□□ 2
HFM1A2PYH4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC27.58■■■□□ 2
HFM1A2PYH4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC27.58■■■□□ 2
HFM1A2PYH4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
HFM1A2PYH4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
HFM1A2PYH4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
HFM1A2PYH4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC27.57■■■□□ 2
HFM1A2PYH4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
HFM1A2PYH4 MYLKP1-201ENST00000509077 1580 ntBASIC27.57■■■□□ 2
HFM1A2PYH4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC27.57■■■□□ 2
HFM1A2PYH4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC27.57■■■□□ 2
HFM1A2PYH4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC27.57■■■□□ 2
HFM1A2PYH4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC27.57■■■□□ 2
HFM1A2PYH4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC27.57■■■□□ 2
HFM1A2PYH4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC27.57■■■□□ 2
HFM1A2PYH4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC27.57■■■□□ 2
HFM1A2PYH4 AC069148.1-201ENST00000608741 768 ntBASIC27.57■■■□□ 2
HFM1A2PYH4 NPAP1P7-201ENST00000613027 823 ntBASIC27.57■■■□□ 2
HFM1A2PYH4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC27.57■■■□□ 2
HFM1A2PYH4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC27.57■■■□□ 2
HFM1A2PYH4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC27.56■■■□□ 2
HFM1A2PYH4 AC112777.1-201ENST00000540175 1423 ntBASIC27.56■■■□□ 2
HFM1A2PYH4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC27.56■■■□□ 2
HFM1A2PYH4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC27.56■■■□□ 2
HFM1A2PYH4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
HFM1A2PYH4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC27.56■■■□□ 2
HFM1A2PYH4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC27.56■■■□□ 2
HFM1A2PYH4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC27.56■■■□□ 2
HFM1A2PYH4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC27.56■■■□□ 2
HFM1A2PYH4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC27.56■■■□□ 2
HFM1A2PYH4 RNF126P1-202ENST00000569893 925 ntBASIC27.56■■■□□ 2
HFM1A2PYH4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC27.56■■■□□ 2
HFM1A2PYH4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC27.56■■■□□ 2
HFM1A2PYH4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC27.56■■■□□ 2
HFM1A2PYH4 KRT89P-201ENST00000620027 1478 ntBASIC27.56■■■□□ 2
HFM1A2PYH4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
HFM1A2PYH4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC27.56■■■□□ 2
HFM1A2PYH4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC27.55■■■□□ 2
HFM1A2PYH4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC27.55■■■□□ 2
HFM1A2PYH4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
HFM1A2PYH4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC27.55■■■□□ 2
HFM1A2PYH4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
HFM1A2PYH4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
HFM1A2PYH4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC27.55■■■□□ 2
HFM1A2PYH4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC27.55■■■□□ 2
HFM1A2PYH4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC27.55■■■□□ 2
HFM1A2PYH4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC27.55■■■□□ 2
HFM1A2PYH4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
HFM1A2PYH4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
HFM1A2PYH4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC27.55■■■□□ 2
HFM1A2PYH4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC27.55■■■□□ 2
HFM1A2PYH4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC27.54■■■□□ 2
HFM1A2PYH4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC27.54■■■□□ 2
HFM1A2PYH4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC27.54■■■□□ 2
HFM1A2PYH4 SDHAP2-201ENST00000455183 2001 ntBASIC27.54■■■□□ 2
HFM1A2PYH4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
HFM1A2PYH4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC27.54■■■□□ 2
HFM1A2PYH4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC27.54■■■□□ 2
HFM1A2PYH4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC27.54■■■□□ 2
HFM1A2PYH4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC27.54■■■□□ 2
HFM1A2PYH4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
HFM1A2PYH4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC27.54■■■□□ 2
HFM1A2PYH4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC27.54■■■□□ 2
HFM1A2PYH4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
HFM1A2PYH4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
HFM1A2PYH4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
HFM1A2PYH4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC27.53■■■□□ 2
HFM1A2PYH4 BX323043.1-201ENST00000641006 1765 ntBASIC27.53■■■□□ 2
HFM1A2PYH4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms