Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC163A0A0D9SF12 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC163A0A0D9SF12 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 AC091607.1-201ENST00000490318 1060 ntBASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 SLC25A1P1-201ENST00000528351 927 ntBASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 BNIP3P18-201ENST00000593976 575 ntBASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 FEM1AP3-201ENST00000403722 1741 ntBASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC163A0A0D9SF12 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 AC114341.1-201ENST00000618070 349 ntBASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC163A0A0D9SF12 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 AC138932.1-201ENST00000534164 6830 ntBASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 AC018712.1-201ENST00000455767 687 ntBASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC163A0A0D9SF12 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms