Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RIMBP3Q9UFD9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC29.69■■■□□ 2.34
RIMBP3Q9UFD9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC29.69■■■□□ 2.34
RIMBP3Q9UFD9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC29.69■■■□□ 2.34
RIMBP3Q9UFD9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC29.69■■■□□ 2.34
RIMBP3Q9UFD9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
RIMBP3Q9UFD9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC29.69■■■□□ 2.34
RIMBP3Q9UFD9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC29.68■■■□□ 2.34
RIMBP3Q9UFD9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC29.68■■■□□ 2.34
RIMBP3Q9UFD9 OR8S1-201ENST00000310194 1080 ntBASIC29.68■■■□□ 2.34
RIMBP3Q9UFD9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
RIMBP3Q9UFD9 CEND1P1-201ENST00000451006 455 ntBASIC29.68■■■□□ 2.34
RIMBP3Q9UFD9 MIR3180-4-201ENST00000582223 153 ntBASIC29.68■■■□□ 2.34
RIMBP3Q9UFD9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC29.68■■■□□ 2.34
RIMBP3Q9UFD9 AL513190.1-201ENST00000621254 727 ntBASIC29.68■■■□□ 2.34
RIMBP3Q9UFD9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC29.68■■■□□ 2.34
RIMBP3Q9UFD9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RIMBP3Q9UFD9 MRPL20P1-201ENST00000400819 433 ntBASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 GAS2L1P1-201ENST00000420145 1480 ntBASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 POLD4-211ENST00000539074 714 ntTSL 3 BASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 AL390955.2-201ENST00000603032 514 ntBASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC29.67■■■□□ 2.34
RIMBP3Q9UFD9 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
RIMBP3Q9UFD9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC29.66■■■□□ 2.34
RIMBP3Q9UFD9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC29.66■■■□□ 2.34
RIMBP3Q9UFD9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC29.66■■■□□ 2.34
RIMBP3Q9UFD9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RIMBP3Q9UFD9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC29.66■■■□□ 2.34
RIMBP3Q9UFD9 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
RIMBP3Q9UFD9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
RIMBP3Q9UFD9 PMS2P4-201ENST00000412466 1052 ntBASIC29.66■■■□□ 2.34
RIMBP3Q9UFD9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
RIMBP3Q9UFD9 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC29.66■■■□□ 2.34
RIMBP3Q9UFD9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 AL031432.2-201ENST00000566714 459 ntBASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 AL928711.1-201ENST00000570165 459 ntBASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 YTHDF3-AS1-201ENST00000603538 718 ntBASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 AL138831.2-201ENST00000606564 490 ntBASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
RIMBP3Q9UFD9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
RIMBP3Q9UFD9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC29.64■■■□□ 2.34
RIMBP3Q9UFD9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
RIMBP3Q9UFD9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC29.64■■■□□ 2.34
RIMBP3Q9UFD9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
RIMBP3Q9UFD9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
RIMBP3Q9UFD9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 PDPK2P-202ENST00000562415 1191 ntBASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 AL109659.2-201ENST00000606809 1674 ntBASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 AC011467.2-201ENST00000598425 242 ntBASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC29.63■■■□□ 2.33
RIMBP3Q9UFD9 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC29.63■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms