Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 HLA-F-220ENST00000434407 884 ntBASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 BX276092.5-203ENST00000456199 560 ntBASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 AC104390.1-201ENST00000555663 520 ntBASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LRIT1Q9P2V4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 HOXB1-202ENST00000577092 1414 ntBASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 AL121672.3-201ENST00000608644 468 ntBASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 AC092119.3-201ENST00000612618 583 ntBASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 NPAP1P7-201ENST00000613027 823 ntBASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 AL162741.1-201ENST00000565563 1558 ntBASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRIT1Q9P2V4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 AL450487.1-201ENST00000426799 995 ntBASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 TSSC2-201ENST00000450217 709 ntBASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 AC010240.3-201ENST00000607688 395 ntBASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRIT1Q9P2V4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 AC016734.2-201ENST00000624325 1377 ntBASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 AC092329.2-201ENST00000598402 547 ntBASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 AL121894.2-201ENST00000602977 491 ntBASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRIT1Q9P2V4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms