Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 KSR1P1-201ENST00000446298 240 ntBASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 AF186192.3-201ENST00000583427 947 ntBASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.43■□□□□ 0.38
CTPS2Q9NRF8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 AC083906.6-201ENST00000641366 219 ntBASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 KRT8P41-201ENST00000533985 1514 ntBASIC17.42■□□□□ 0.38
CTPS2Q9NRF8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 AC005332.8-201ENST00000622750 2735 ntBASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 AC073195.1-201ENST00000607241 877 ntBASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 AC131212.4-201ENST00000623606 975 ntBASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 CR392000.1-201ENST00000624770 1228 ntBASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTPS2Q9NRF8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 AC004980.1-204ENST00000429707 299 ntBASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 Z85996.1-201ENST00000494644 937 ntBASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CTPS2Q9NRF8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms