Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.18■□□□□ 0.02
NKX6-2Q9C056 AL136162.1-201ENST00000607711 1078 ntBASIC15.18■□□□□ 0.02
NKX6-2Q9C056 AL354811.1-201ENST00000610286 706 ntBASIC15.18■□□□□ 0.02
NKX6-2Q9C056 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
NKX6-2Q9C056 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX6-2Q9C056 DUX4L6-201ENST00000626483 1275 ntBASIC15.18■□□□□ 0.02
NKX6-2Q9C056 DUX4L1-201ENST00000627662 1275 ntBASIC15.18■□□□□ 0.02
NKX6-2Q9C056 DUX4L8-201ENST00000629013 1275 ntBASIC15.18■□□□□ 0.02
NKX6-2Q9C056 DUX4L3-201ENST00000630187 1275 ntBASIC15.18■□□□□ 0.02
NKX6-2Q9C056 DUX4L7-201ENST00000630678 1275 ntBASIC15.18■□□□□ 0.02
NKX6-2Q9C056 DUX4L5-201ENST00000630834 1275 ntBASIC15.18■□□□□ 0.02
NKX6-2Q9C056 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NKX6-2Q9C056 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.18■□□□□ 0.02
NKX6-2Q9C056 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
NKX6-2Q9C056 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.18■□□□□ 0.02
NKX6-2Q9C056 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
NKX6-2Q9C056 TEX21P-204ENST00000641479 1693 ntBASIC15.18■□□□□ 0.02
NKX6-2Q9C056 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NKX6-2Q9C056 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.18■□□□□ 0.02
NKX6-2Q9C056 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NKX6-2Q9C056 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 AC092850.2-201ENST00000623821 2697 ntBASIC15.17■□□□□ 0.02
NKX6-2Q9C056 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 AL356441.2-201ENST00000443009 864 ntBASIC15.17■□□□□ 0.02
NKX6-2Q9C056 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 CCDC92B-201ENST00000575506 885 ntBASIC15.17■□□□□ 0.02
NKX6-2Q9C056 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX6-2Q9C056 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-2Q9C056 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms