Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 AC243591.1-201ENST00000452967 1364 ntBASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 AL357033.4-201ENST00000617703 1807 ntBASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 LINC01521-201ENST00000504184 1943 ntBASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
KRTAP4-1Q9BYQ7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 AL353692.3-201ENST00000407031 1396 ntBASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 FAM197Y8-203ENST00000450145 560 ntBASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 AC009065.1-201ENST00000564055 1225 ntBASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 AC024563.2-201ENST00000603282 481 ntBASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
KRTAP4-1Q9BYQ7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 UBQLN4P1-201ENST00000461599 1801 ntBASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 FEM1AP3-201ENST00000403722 1741 ntBASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 CYP51A1P1-201ENST00000492267 1507 ntBASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
KRTAP4-1Q9BYQ7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms