Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 AC138028.4-201ENST00000564984 1845 ntBASIC18.24■□□□□ 0.51
EBF4Q9BQW3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 CDCA4P2-201ENST00000441182 718 ntBASIC18.24■□□□□ 0.51
EBF4Q9BQW3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 AC080038.1-201ENST00000611274 1154 ntBASIC18.24■□□□□ 0.51
EBF4Q9BQW3 AC092118.2-201ENST00000613495 667 ntBASIC18.24■□□□□ 0.51
EBF4Q9BQW3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
EBF4Q9BQW3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 AL162430.1-201ENST00000480705 870 ntBASIC18.23■□□□□ 0.51
EBF4Q9BQW3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 AC022517.1-201ENST00000592429 346 ntBASIC18.23■□□□□ 0.51
EBF4Q9BQW3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 AC009053.2-201ENST00000563701 2365 ntBASIC18.23■□□□□ 0.51
EBF4Q9BQW3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.23■□□□□ 0.51
EBF4Q9BQW3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 REXO1L9P-201ENST00000604264 2108 ntBASIC18.22■□□□□ 0.51
EBF4Q9BQW3 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.22■□□□□ 0.51
EBF4Q9BQW3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 PNMA6B-201ENST00000538162 1200 ntBASIC18.22■□□□□ 0.51
EBF4Q9BQW3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 HLA-B-256ENST00000639848 1089 ntBASIC18.22■□□□□ 0.51
EBF4Q9BQW3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 KRT8P41-201ENST00000533985 1514 ntBASIC18.22■□□□□ 0.51
EBF4Q9BQW3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.22■□□□□ 0.51
EBF4Q9BQW3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
EBF4Q9BQW3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
EBF4Q9BQW3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EBF4Q9BQW3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
EBF4Q9BQW3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.21■□□□□ 0.51
EBF4Q9BQW3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
EBF4Q9BQW3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms