Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COX4I2Q96KJ9 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.35■□□□□ 0.37
COX4I2Q96KJ9 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.35■□□□□ 0.37
COX4I2Q96KJ9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.35■□□□□ 0.37
COX4I2Q96KJ9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COX4I2Q96KJ9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.35■□□□□ 0.37
COX4I2Q96KJ9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COX4I2Q96KJ9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.35■□□□□ 0.37
COX4I2Q96KJ9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.35■□□□□ 0.37
COX4I2Q96KJ9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COX4I2Q96KJ9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
COX4I2Q96KJ9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COX4I2Q96KJ9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COX4I2Q96KJ9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
COX4I2Q96KJ9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COX4I2Q96KJ9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
COX4I2Q96KJ9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COX4I2Q96KJ9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COX4I2Q96KJ9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
COX4I2Q96KJ9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.33■□□□□ 0.37
COX4I2Q96KJ9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COX4I2Q96KJ9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 ABALON-201ENST00000629058 1903 ntBASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 AL031598.1-201ENST00000561511 1773 ntBASIC17.33■□□□□ 0.36
COX4I2Q96KJ9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 AC061975.6-201ENST00000579045 1553 ntBASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 PKD1P1-201ENST00000458669 6805 ntBASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 RPS2P55-201ENST00000397318 883 ntBASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 CDV3P1-201ENST00000471403 739 ntBASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 AC107956.1-201ENST00000494359 873 ntBASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 AC133561.5-201ENST00000635547 218 ntBASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
COX4I2Q96KJ9 ESPNP-201ENST00000270691 2015 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms