Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC32■■■□□ 2.71
TRIM41Q8WV44 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
TRIM41Q8WV44 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC32■■■□□ 2.71
TRIM41Q8WV44 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC32■■■□□ 2.71
TRIM41Q8WV44 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
TRIM41Q8WV44 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC32■■■□□ 2.71
TRIM41Q8WV44 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC32■■■□□ 2.71
TRIM41Q8WV44 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC32■■■□□ 2.71
TRIM41Q8WV44 AC073648.2-201ENST00000510116 352 ntBASIC32■■■□□ 2.71
TRIM41Q8WV44 PGAM5P1-201ENST00000518923 814 ntBASIC32■■■□□ 2.71
TRIM41Q8WV44 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC32■■■□□ 2.71
TRIM41Q8WV44 AP002414.4-201ENST00000589764 1148 ntBASIC32■■■□□ 2.71
TRIM41Q8WV44 RPS15-207ENST00000591032 550 ntTSL 3 BASIC32■■■□□ 2.71
TRIM41Q8WV44 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
TRIM41Q8WV44 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC32■■■□□ 2.71
TRIM41Q8WV44 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
TRIM41Q8WV44 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
TRIM41Q8WV44 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC32■■■□□ 2.71
TRIM41Q8WV44 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC31.99■■■□□ 2.71
TRIM41Q8WV44 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
TRIM41Q8WV44 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
TRIM41Q8WV44 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
TRIM41Q8WV44 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
TRIM41Q8WV44 VPS51-217ENST00000639871 243 ntTSL 5 BASIC31.99■■■□□ 2.71
TRIM41Q8WV44 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
TRIM41Q8WV44 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
TRIM41Q8WV44 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC31.99■■■□□ 2.71
TRIM41Q8WV44 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC31.99■■■□□ 2.71
TRIM41Q8WV44 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
TRIM41Q8WV44 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
TRIM41Q8WV44 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC31.99■■■□□ 2.71
TRIM41Q8WV44 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
TRIM41Q8WV44 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
TRIM41Q8WV44 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC31.99■■■□□ 2.71
TRIM41Q8WV44 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC31.98■■■□□ 2.71
TRIM41Q8WV44 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC31.98■■■□□ 2.71
TRIM41Q8WV44 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
TRIM41Q8WV44 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
TRIM41Q8WV44 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC31.98■■■□□ 2.71
TRIM41Q8WV44 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
TRIM41Q8WV44 AC098831.1-202ENST00000438821 336 ntBASIC31.98■■■□□ 2.71
TRIM41Q8WV44 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC31.98■■■□□ 2.71
TRIM41Q8WV44 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
TRIM41Q8WV44 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC31.98■■■□□ 2.71
TRIM41Q8WV44 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
TRIM41Q8WV44 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC31.98■■■□□ 2.71
TRIM41Q8WV44 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC31.98■■■□□ 2.71
TRIM41Q8WV44 GPAT2P1-201ENST00000444924 1672 ntBASIC31.98■■■□□ 2.71
TRIM41Q8WV44 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
TRIM41Q8WV44 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
TRIM41Q8WV44 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
TRIM41Q8WV44 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
TRIM41Q8WV44 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC31.97■■■□□ 2.71
TRIM41Q8WV44 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC31.97■■■□□ 2.71
TRIM41Q8WV44 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
TRIM41Q8WV44 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC31.97■■■□□ 2.71
TRIM41Q8WV44 KRT18P31-201ENST00000506277 1292 ntBASIC31.97■■■□□ 2.71
TRIM41Q8WV44 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC31.97■■■□□ 2.71
TRIM41Q8WV44 KRT8P3-201ENST00000519669 1449 ntBASIC31.97■■■□□ 2.71
TRIM41Q8WV44 FEM1AP3-201ENST00000403722 1741 ntBASIC31.97■■■□□ 2.71
TRIM41Q8WV44 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC31.97■■■□□ 2.71
TRIM41Q8WV44 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
TRIM41Q8WV44 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
TRIM41Q8WV44 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC31.96■■■□□ 2.71
TRIM41Q8WV44 AL645929.1-201ENST00000420084 975 ntBASIC31.96■■■□□ 2.71
TRIM41Q8WV44 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC31.96■■■□□ 2.71
TRIM41Q8WV44 KRT16P4-201ENST00000453883 522 ntBASIC31.96■■■□□ 2.71
TRIM41Q8WV44 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC31.96■■■□□ 2.71
TRIM41Q8WV44 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
TRIM41Q8WV44 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
TRIM41Q8WV44 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
TRIM41Q8WV44 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
TRIM41Q8WV44 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC31.95■■■□□ 2.71
TRIM41Q8WV44 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
TRIM41Q8WV44 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
TRIM41Q8WV44 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
TRIM41Q8WV44 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
TRIM41Q8WV44 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
TRIM41Q8WV44 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
TRIM41Q8WV44 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
TRIM41Q8WV44 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
TRIM41Q8WV44 BX276092.5-203ENST00000456199 560 ntBASIC31.95■■■□□ 2.71
TRIM41Q8WV44 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC31.95■■■□□ 2.71
TRIM41Q8WV44 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
TRIM41Q8WV44 FOSL1P1-201ENST00000511041 816 ntBASIC31.95■■■□□ 2.71
TRIM41Q8WV44 PNN-202ENST00000553331 656 ntTSL 3 BASIC31.95■■■□□ 2.71
TRIM41Q8WV44 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC31.95■■■□□ 2.71
TRIM41Q8WV44 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
TRIM41Q8WV44 AC092364.2-202ENST00000597012 1073 ntBASIC31.95■■■□□ 2.71
TRIM41Q8WV44 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
TRIM41Q8WV44 UBQLN4P1-201ENST00000461599 1801 ntBASIC31.95■■■□□ 2.7
TRIM41Q8WV44 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
TRIM41Q8WV44 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
TRIM41Q8WV44 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TRIM41Q8WV44 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TRIM41Q8WV44 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC31.94■■■□□ 2.7
TRIM41Q8WV44 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC31.94■■■□□ 2.7
TRIM41Q8WV44 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
TRIM41Q8WV44 PHB2-202ENST00000440277 996 ntTSL 5 BASIC31.94■■■□□ 2.7
TRIM41Q8WV44 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC31.94■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms