Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.64■□□□□ 0.89
KLHDC9Q8NEP7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 AF228730.7-201ENST00000641842 219 ntBASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHDC9Q8NEP7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 MIR574-201ENST00000385209 96 ntBASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 AP001005.1-201ENST00000571755 1248 ntBASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 AC117500.6-201ENST00000624871 588 ntBASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHDC9Q8NEP7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 IL9RP2-201ENST00000423948 1312 ntBASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 AC011840.4-201ENST00000578471 627 ntBASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.61■□□□□ 0.89
KLHDC9Q8NEP7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHDC9Q8NEP7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 PMS2P1-201ENST00000431037 1228 ntBASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 FAM197Y8-203ENST00000450145 560 ntBASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 MINOS1P3-201ENST00000457048 203 ntBASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 AC009065.1-201ENST00000564055 1225 ntBASIC20.59■□□□□ 0.89
KLHDC9Q8NEP7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms