Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 RPS2P55-201ENST00000397318 883 ntBASIC17.15■□□□□ 0.34
LSMEM1Q8N8F7 AC012618.2-201ENST00000428058 849 ntBASIC17.15■□□□□ 0.34
LSMEM1Q8N8F7 AC107956.1-201ENST00000494359 873 ntBASIC17.15■□□□□ 0.34
LSMEM1Q8N8F7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSMEM1Q8N8F7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.15■□□□□ 0.34
LSMEM1Q8N8F7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.15■□□□□ 0.34
LSMEM1Q8N8F7 AP001412.1-201ENST00000608405 714 ntBASIC17.15■□□□□ 0.34
LSMEM1Q8N8F7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.15■□□□□ 0.34
LSMEM1Q8N8F7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSMEM1Q8N8F7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
LSMEM1Q8N8F7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.15■□□□□ 0.34
LSMEM1Q8N8F7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.15■□□□□ 0.34
LSMEM1Q8N8F7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSMEM1Q8N8F7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.15■□□□□ 0.34
LSMEM1Q8N8F7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LSMEM1Q8N8F7 AC096733.2-201ENST00000609937 1394 ntBASIC17.15■□□□□ 0.34
LSMEM1Q8N8F7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.14■□□□□ 0.34
LSMEM1Q8N8F7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 NUDT16P1-203ENST00000513809 620 ntBASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LSMEM1Q8N8F7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 AC233702.5-201ENST00000584107 538 ntBASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LSMEM1Q8N8F7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 AC079598.2-202ENST00000546624 1451 ntBASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 ABHD17AP1-201ENST00000358206 933 ntBASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.12■□□□□ 0.33
LSMEM1Q8N8F7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms