Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.87■□□□□ 0.45
RAB43Q86YS6 KRT8P11-201ENST00000409686 1436 ntBASIC17.87■□□□□ 0.45
RAB43Q86YS6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.87■□□□□ 0.45
RAB43Q86YS6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB43Q86YS6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.87■□□□□ 0.45
RAB43Q86YS6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RAB43Q86YS6 AL158211.5-201ENST00000623583 2518 ntBASIC17.87■□□□□ 0.45
RAB43Q86YS6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB43Q86YS6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB43Q86YS6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAB43Q86YS6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB43Q86YS6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB43Q86YS6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAB43Q86YS6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB43Q86YS6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB43Q86YS6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAB43Q86YS6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB43Q86YS6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB43Q86YS6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB43Q86YS6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB43Q86YS6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB43Q86YS6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RAB43Q86YS6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB43Q86YS6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB43Q86YS6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAB43Q86YS6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB43Q86YS6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB43Q86YS6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB43Q86YS6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB43Q86YS6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RAB43Q86YS6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB43Q86YS6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAB43Q86YS6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.85■□□□□ 0.45
RAB43Q86YS6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
RAB43Q86YS6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RAB43Q86YS6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.85■□□□□ 0.45
RAB43Q86YS6 TCF3P1-201ENST00000423021 1937 ntBASIC17.85■□□□□ 0.45
RAB43Q86YS6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB43Q86YS6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.85■□□□□ 0.45
RAB43Q86YS6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.85■□□□□ 0.45
RAB43Q86YS6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.85■□□□□ 0.45
RAB43Q86YS6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAB43Q86YS6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.85■□□□□ 0.45
RAB43Q86YS6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB43Q86YS6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.85■□□□□ 0.45
RAB43Q86YS6 AC011558.1-201ENST00000623459 338 ntBASIC17.85■□□□□ 0.45
RAB43Q86YS6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB43Q86YS6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RAB43Q86YS6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB43Q86YS6 AC093503.3-201ENST00000624917 2352 ntBASIC17.84■□□□□ 0.45
RAB43Q86YS6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RAB43Q86YS6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB43Q86YS6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB43Q86YS6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.84■□□□□ 0.45
RAB43Q86YS6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB43Q86YS6 LTB4R2-202ENST00000528054 3092 ntBASIC17.84■□□□□ 0.45
RAB43Q86YS6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB43Q86YS6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RAB43Q86YS6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB43Q86YS6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB43Q86YS6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB43Q86YS6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB43Q86YS6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB43Q86YS6 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.84■□□□□ 0.45
RAB43Q86YS6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RAB43Q86YS6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB43Q86YS6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB43Q86YS6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB43Q86YS6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB43Q86YS6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RAB43Q86YS6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RAB43Q86YS6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB43Q86YS6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RAB43Q86YS6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.84■□□□□ 0.45
RAB43Q86YS6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.84■□□□□ 0.45
RAB43Q86YS6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.83■□□□□ 0.45
RAB43Q86YS6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB43Q86YS6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB43Q86YS6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB43Q86YS6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB43Q86YS6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.83■□□□□ 0.45
RAB43Q86YS6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RAB43Q86YS6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.83■□□□□ 0.44
RAB43Q86YS6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms