Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PACS2Q86VP3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PACS2Q86VP3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PACS2Q86VP3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PACS2Q86VP3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PACS2Q86VP3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PACS2Q86VP3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PACS2Q86VP3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PACS2Q86VP3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PACS2Q86VP3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PACS2Q86VP3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PACS2Q86VP3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PACS2Q86VP3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PACS2Q86VP3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.81■□□□□ 0.6
PACS2Q86VP3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PACS2Q86VP3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PACS2Q86VP3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PACS2Q86VP3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.8■□□□□ 0.6
PACS2Q86VP3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PACS2Q86VP3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PACS2Q86VP3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PACS2Q86VP3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PACS2Q86VP3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PACS2Q86VP3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PACS2Q86VP3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PACS2Q86VP3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PACS2Q86VP3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PACS2Q86VP3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PACS2Q86VP3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PACS2Q86VP3 MIPEPP3-201ENST00000412105 444 ntBASIC18.8■□□□□ 0.6
PACS2Q86VP3 BX276092.2-201ENST00000417668 665 ntBASIC18.8■□□□□ 0.6
PACS2Q86VP3 AC142086.2-201ENST00000569753 217 ntBASIC18.8■□□□□ 0.6
PACS2Q86VP3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.8■□□□□ 0.6
PACS2Q86VP3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
PACS2Q86VP3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.8■□□□□ 0.6
PACS2Q86VP3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PACS2Q86VP3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PACS2Q86VP3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.8■□□□□ 0.6
PACS2Q86VP3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PACS2Q86VP3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PACS2Q86VP3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS2Q86VP3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PACS2Q86VP3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS2Q86VP3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS2Q86VP3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.79■□□□□ 0.6
PACS2Q86VP3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PACS2Q86VP3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS2Q86VP3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS2Q86VP3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.79■□□□□ 0.6
PACS2Q86VP3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS2Q86VP3 LINC01126-201ENST00000623515 1646 ntBASIC18.79■□□□□ 0.6
PACS2Q86VP3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PACS2Q86VP3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS2Q86VP3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PACS2Q86VP3 MCRIP2P1-201ENST00000394346 511 ntBASIC18.79■□□□□ 0.6
PACS2Q86VP3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PACS2Q86VP3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.79■□□□□ 0.6
PACS2Q86VP3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.79■□□□□ 0.6
PACS2Q86VP3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.79■□□□□ 0.6
PACS2Q86VP3 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.79■□□□□ 0.6
PACS2Q86VP3 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.79■□□□□ 0.6
PACS2Q86VP3 AC133041.1-202ENST00000642053 222 ntBASIC18.79■□□□□ 0.6
PACS2Q86VP3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS2Q86VP3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PACS2Q86VP3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.79■□□□□ 0.6
PACS2Q86VP3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.79■□□□□ 0.6
PACS2Q86VP3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.79■□□□□ 0.6
PACS2Q86VP3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
PACS2Q86VP3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS2Q86VP3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PACS2Q86VP3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms