Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
VARS2Q5ST30 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VARS2Q5ST30 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VARS2Q5ST30 AL162741.1-201ENST00000565563 1558 ntBASIC19.81■□□□□ 0.76
VARS2Q5ST30 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VARS2Q5ST30 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
VARS2Q5ST30 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VARS2Q5ST30 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VARS2Q5ST30 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.81■□□□□ 0.76
VARS2Q5ST30 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VARS2Q5ST30 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VARS2Q5ST30 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VARS2Q5ST30 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.81■□□□□ 0.76
VARS2Q5ST30 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.8■□□□□ 0.76
VARS2Q5ST30 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VARS2Q5ST30 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.8■□□□□ 0.76
VARS2Q5ST30 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
VARS2Q5ST30 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VARS2Q5ST30 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VARS2Q5ST30 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.8■□□□□ 0.76
VARS2Q5ST30 Z99916.3-201ENST00000623422 1080 ntBASIC19.8■□□□□ 0.76
VARS2Q5ST30 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VARS2Q5ST30 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
VARS2Q5ST30 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VARS2Q5ST30 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.8■□□□□ 0.76
VARS2Q5ST30 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VARS2Q5ST30 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
VARS2Q5ST30 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
VARS2Q5ST30 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
VARS2Q5ST30 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.8■□□□□ 0.76
VARS2Q5ST30 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.79■□□□□ 0.76
VARS2Q5ST30 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VARS2Q5ST30 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.79■□□□□ 0.76
VARS2Q5ST30 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VARS2Q5ST30 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VARS2Q5ST30 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VARS2Q5ST30 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.79■□□□□ 0.76
VARS2Q5ST30 MIR662-201ENST00000384847 95 ntBASIC19.79■□□□□ 0.76
VARS2Q5ST30 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.79■□□□□ 0.76
VARS2Q5ST30 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.79■□□□□ 0.76
VARS2Q5ST30 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
VARS2Q5ST30 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.79■□□□□ 0.76
VARS2Q5ST30 NPAP1P7-201ENST00000613027 823 ntBASIC19.79■□□□□ 0.76
VARS2Q5ST30 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.79■□□□□ 0.76
VARS2Q5ST30 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.79■□□□□ 0.76
VARS2Q5ST30 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VARS2Q5ST30 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
VARS2Q5ST30 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
VARS2Q5ST30 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARS2Q5ST30 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.78■□□□□ 0.76
VARS2Q5ST30 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VARS2Q5ST30 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.78■□□□□ 0.76
VARS2Q5ST30 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.78■□□□□ 0.76
VARS2Q5ST30 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARS2Q5ST30 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARS2Q5ST30 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARS2Q5ST30 AIRN-201ENST00000601203 4374 ntBASIC19.78■□□□□ 0.76
VARS2Q5ST30 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
VARS2Q5ST30 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
VARS2Q5ST30 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
VARS2Q5ST30 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARS2Q5ST30 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARS2Q5ST30 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
VARS2Q5ST30 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARS2Q5ST30 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.78■□□□□ 0.76
VARS2Q5ST30 AL691432.3-201ENST00000621860 400 ntBASIC19.78■□□□□ 0.76
VARS2Q5ST30 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARS2Q5ST30 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VARS2Q5ST30 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARS2Q5ST30 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARS2Q5ST30 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VARS2Q5ST30 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.78■□□□□ 0.76
VARS2Q5ST30 HEIH-201ENST00000623091 1652 ntBASIC19.78■□□□□ 0.76
VARS2Q5ST30 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VARS2Q5ST30 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VARS2Q5ST30 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VARS2Q5ST30 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
VARS2Q5ST30 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
VARS2Q5ST30 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VARS2Q5ST30 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VARS2Q5ST30 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VARS2Q5ST30 BX276092.5-203ENST00000456199 560 ntBASIC19.77■□□□□ 0.76
VARS2Q5ST30 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.77■□□□□ 0.76
VARS2Q5ST30 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.77■□□□□ 0.76
VARS2Q5ST30 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
VARS2Q5ST30 CLEC4GP1-201ENST00000596555 870 ntBASIC19.77■□□□□ 0.76
VARS2Q5ST30 AL121672.3-201ENST00000608644 468 ntBASIC19.77■□□□□ 0.76
VARS2Q5ST30 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VARS2Q5ST30 AC092119.3-201ENST00000612618 583 ntBASIC19.77■□□□□ 0.76
VARS2Q5ST30 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
VARS2Q5ST30 AC093525.10-201ENST00000625130 1569 ntBASIC19.77■□□□□ 0.76
VARS2Q5ST30 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VARS2Q5ST30 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
VARS2Q5ST30 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.77■□□□□ 0.76
VARS2Q5ST30 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
VARS2Q5ST30 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
VARS2Q5ST30 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.76■□□□□ 0.75
VARS2Q5ST30 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
VARS2Q5ST30 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VARS2Q5ST30 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms