Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SHROOM1Q2M3G4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.83■■□□□ 1.08
SHROOM1Q2M3G4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
SHROOM1Q2M3G4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
SHROOM1Q2M3G4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 MTMR9LP-203ENST00000426597 1545 ntBASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 CHCHD2P8-201ENST00000429873 447 ntBASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 TPSP2-201ENST00000561760 610 ntBASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 PRELID1P1-202ENST00000567272 903 ntBASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 AL161938.1-201ENST00000569833 2180 ntBASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SHROOM1Q2M3G4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 AC034236.2-201ENST00000606662 1610 ntBASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 AL357033.4-201ENST00000617703 1807 ntBASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.81■■□□□ 1.08
SHROOM1Q2M3G4 KRT18P1-202ENST00000452408 1331 ntBASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 RN7SL510P-201ENST00000581311 263 ntBASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 AC005332.3-201ENST00000589904 676 ntBASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 AL732292.2-201ENST00000609649 430 ntBASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SHROOM1Q2M3G4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 Z98044.1-201ENST00000632503 1764 ntBASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.79■■□□□ 1.08
SHROOM1Q2M3G4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms