Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
VSX2P58304 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VSX2P58304 AC008556.1-201ENST00000610908 2040 ntBASIC17.91■□□□□ 0.46
VSX2P58304 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
VSX2P58304 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VSX2P58304 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.9■□□□□ 0.46
VSX2P58304 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.9■□□□□ 0.46
VSX2P58304 AC138932.1-201ENST00000534164 6830 ntBASIC17.9■□□□□ 0.46
VSX2P58304 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VSX2P58304 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VSX2P58304 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VSX2P58304 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
VSX2P58304 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VSX2P58304 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.9■□□□□ 0.46
VSX2P58304 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
VSX2P58304 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VSX2P58304 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.9■□□□□ 0.46
VSX2P58304 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.9■□□□□ 0.46
VSX2P58304 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.9■□□□□ 0.46
VSX2P58304 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
VSX2P58304 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VSX2P58304 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VSX2P58304 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.9■□□□□ 0.46
VSX2P58304 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
VSX2P58304 DUX4L26-201ENST00000489078 1255 ntBASIC17.9■□□□□ 0.46
VSX2P58304 YBX1P2-201ENST00000489612 999 ntBASIC17.9■□□□□ 0.46
VSX2P58304 WWOX-216ENST00000569818 525 ntBASIC17.9■□□□□ 0.46
VSX2P58304 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.9■□□□□ 0.46
VSX2P58304 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
VSX2P58304 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VSX2P58304 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VSX2P58304 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VSX2P58304 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
VSX2P58304 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VSX2P58304 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
VSX2P58304 AL109659.2-201ENST00000606809 1674 ntBASIC17.9■□□□□ 0.46
VSX2P58304 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VSX2P58304 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VSX2P58304 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.89■□□□□ 0.45
VSX2P58304 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VSX2P58304 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
VSX2P58304 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VSX2P58304 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
VSX2P58304 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
VSX2P58304 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.89■□□□□ 0.45
VSX2P58304 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.89■□□□□ 0.45
VSX2P58304 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.89■□□□□ 0.45
VSX2P58304 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
VSX2P58304 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
VSX2P58304 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
VSX2P58304 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VSX2P58304 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
VSX2P58304 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
VSX2P58304 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSX2P58304 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VSX2P58304 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSX2P58304 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.88■□□□□ 0.45
VSX2P58304 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.88■□□□□ 0.45
VSX2P58304 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VSX2P58304 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSX2P58304 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
VSX2P58304 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSX2P58304 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSX2P58304 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSX2P58304 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSX2P58304 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.88■□□□□ 0.45
VSX2P58304 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.88■□□□□ 0.45
VSX2P58304 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSX2P58304 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.88■□□□□ 0.45
VSX2P58304 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.88■□□□□ 0.45
VSX2P58304 AC011558.1-201ENST00000623459 338 ntBASIC17.88■□□□□ 0.45
VSX2P58304 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.88■□□□□ 0.45
VSX2P58304 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VSX2P58304 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VSX2P58304 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSX2P58304 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSX2P58304 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VSX2P58304 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VSX2P58304 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VSX2P58304 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VSX2P58304 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VSX2P58304 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VSX2P58304 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms