Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATN1P54259 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATN1P54259 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATN1P54259 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
ATN1P54259 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.6■□□□□ 0.89
ATN1P54259 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATN1P54259 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.6■□□□□ 0.89
ATN1P54259 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATN1P54259 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATN1P54259 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATN1P54259 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.59■□□□□ 0.89
ATN1P54259 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATN1P54259 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.59■□□□□ 0.89
ATN1P54259 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATN1P54259 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.59■□□□□ 0.89
ATN1P54259 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.59■□□□□ 0.89
ATN1P54259 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATN1P54259 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.59■□□□□ 0.89
ATN1P54259 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.59■□□□□ 0.89
ATN1P54259 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.59■□□□□ 0.89
ATN1P54259 AC011840.4-201ENST00000578471 627 ntBASIC20.59■□□□□ 0.89
ATN1P54259 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.59■□□□□ 0.89
ATN1P54259 AC024563.2-201ENST00000603282 481 ntBASIC20.59■□□□□ 0.89
ATN1P54259 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
ATN1P54259 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATN1P54259 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ATN1P54259 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATN1P54259 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATN1P54259 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATN1P54259 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATN1P54259 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATN1P54259 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATN1P54259 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATN1P54259 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATN1P54259 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.58■□□□□ 0.89
ATN1P54259 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ATN1P54259 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.58■□□□□ 0.89
ATN1P54259 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATN1P54259 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.58■□□□□ 0.89
ATN1P54259 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.58■□□□□ 0.89
ATN1P54259 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATN1P54259 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.58■□□□□ 0.89
ATN1P54259 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.58■□□□□ 0.89
ATN1P54259 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATN1P54259 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATN1P54259 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.58■□□□□ 0.89
ATN1P54259 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.58■□□□□ 0.89
ATN1P54259 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.58■□□□□ 0.89
ATN1P54259 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
ATN1P54259 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.58■□□□□ 0.88
ATN1P54259 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.58■□□□□ 0.88
ATN1P54259 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATN1P54259 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATN1P54259 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATN1P54259 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATN1P54259 AL353692.3-201ENST00000407031 1396 ntBASIC20.58■□□□□ 0.88
ATN1P54259 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATN1P54259 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATN1P54259 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.57■□□□□ 0.88
ATN1P54259 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATN1P54259 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.57■□□□□ 0.88
ATN1P54259 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATN1P54259 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATN1P54259 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATN1P54259 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATN1P54259 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATN1P54259 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATN1P54259 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.57■□□□□ 0.88
ATN1P54259 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.57■□□□□ 0.88
ATN1P54259 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.57■□□□□ 0.88
ATN1P54259 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.57■□□□□ 0.88
ATN1P54259 MIR5100-201ENST00000579544 119 ntBASIC20.57■□□□□ 0.88
ATN1P54259 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ATN1P54259 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.57■□□□□ 0.88
ATN1P54259 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.57■□□□□ 0.88
ATN1P54259 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATN1P54259 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATN1P54259 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
ATN1P54259 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATN1P54259 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ATN1P54259 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.57■□□□□ 0.88
ATN1P54259 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.57■□□□□ 0.88
ATN1P54259 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.56■□□□□ 0.88
ATN1P54259 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ATN1P54259 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.56■□□□□ 0.88
ATN1P54259 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ATN1P54259 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATN1P54259 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.56■□□□□ 0.88
ATN1P54259 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATN1P54259 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATN1P54259 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATN1P54259 MIR564-202ENST00000385049 94 ntBASIC20.56■□□□□ 0.88
ATN1P54259 POM121L3P-201ENST00000419331 1163 ntBASIC20.56■□□□□ 0.88
ATN1P54259 AC005104.2-201ENST00000427818 678 ntBASIC20.56■□□□□ 0.88
ATN1P54259 AC017007.3-201ENST00000479865 435 ntBASIC20.56■□□□□ 0.88
ATN1P54259 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC20.56■□□□□ 0.88
ATN1P54259 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ATN1P54259 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.56■□□□□ 0.88
ATN1P54259 AC008608.2-201ENST00000606089 416 ntBASIC20.56■□□□□ 0.88
ATN1P54259 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms