Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.61■□□□□ 0.89
ACLYP53396 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.61■□□□□ 0.89
ACLYP53396 MIR574-201ENST00000385209 96 ntBASIC20.61■□□□□ 0.89
ACLYP53396 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ACLYP53396 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ACLYP53396 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.61■□□□□ 0.89
ACLYP53396 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.61■□□□□ 0.89
ACLYP53396 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.61■□□□□ 0.89
ACLYP53396 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.61■□□□□ 0.89
ACLYP53396 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ACLYP53396 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACLYP53396 AC139530.3-201ENST00000620344 690 ntBASIC20.61■□□□□ 0.89
ACLYP53396 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ACLYP53396 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACLYP53396 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACLYP53396 FEM1AP3-201ENST00000403722 1741 ntBASIC20.61■□□□□ 0.89
ACLYP53396 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.61■□□□□ 0.89
ACLYP53396 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ACLYP53396 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
ACLYP53396 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACLYP53396 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ACLYP53396 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACLYP53396 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACLYP53396 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACLYP53396 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ACLYP53396 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACLYP53396 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACLYP53396 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.6■□□□□ 0.89
ACLYP53396 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.6■□□□□ 0.89
ACLYP53396 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ACLYP53396 AC011840.4-201ENST00000578471 627 ntBASIC20.6■□□□□ 0.89
ACLYP53396 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ACLYP53396 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ACLYP53396 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.6■□□□□ 0.89
ACLYP53396 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACLYP53396 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACLYP53396 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ACLYP53396 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.59■□□□□ 0.89
ACLYP53396 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACLYP53396 LINC01006-201ENST00000333319 2292 ntBASIC20.59■□□□□ 0.89
ACLYP53396 KRT89P-201ENST00000620027 1478 ntBASIC20.59■□□□□ 0.89
ACLYP53396 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ACLYP53396 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.59■□□□□ 0.89
ACLYP53396 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ACLYP53396 FAM197Y8-203ENST00000450145 560 ntBASIC20.59■□□□□ 0.89
ACLYP53396 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.59■□□□□ 0.89
ACLYP53396 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.59■□□□□ 0.89
ACLYP53396 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.59■□□□□ 0.89
ACLYP53396 AL773604.1-201ENST00000617417 272 ntBASIC20.59■□□□□ 0.89
ACLYP53396 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.59■□□□□ 0.89
ACLYP53396 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACLYP53396 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
ACLYP53396 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ACLYP53396 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACLYP53396 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACLYP53396 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ACLYP53396 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
ACLYP53396 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ACLYP53396 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
ACLYP53396 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ACLYP53396 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ACLYP53396 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ACLYP53396 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ACLYP53396 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ACLYP53396 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ACLYP53396 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.58■□□□□ 0.89
ACLYP53396 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.58■□□□□ 0.89
ACLYP53396 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ACLYP53396 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
ACLYP53396 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ACLYP53396 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.58■□□□□ 0.88
ACLYP53396 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
ACLYP53396 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ACLYP53396 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.58■□□□□ 0.88
ACLYP53396 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ACLYP53396 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ACLYP53396 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ACLYP53396 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ACLYP53396 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ACLYP53396 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.57■□□□□ 0.88
ACLYP53396 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
ACLYP53396 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ACLYP53396 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ACLYP53396 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.57■□□□□ 0.88
ACLYP53396 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ACLYP53396 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.57■□□□□ 0.88
ACLYP53396 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.57■□□□□ 0.88
ACLYP53396 KRT18P13-201ENST00000400056 1290 ntBASIC20.57■□□□□ 0.88
ACLYP53396 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.57■□□□□ 0.88
ACLYP53396 POM121L3P-201ENST00000419331 1163 ntBASIC20.57■□□□□ 0.88
ACLYP53396 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.57■□□□□ 0.88
ACLYP53396 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ACLYP53396 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.57■□□□□ 0.88
ACLYP53396 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.57■□□□□ 0.88
ACLYP53396 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ACLYP53396 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.57■□□□□ 0.88
ACLYP53396 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.57■□□□□ 0.88
ACLYP53396 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.57■□□□□ 0.88
ACLYP53396 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ACLYP53396 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms