Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.92■□□□□ 0.94
BRCA2P51587 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
BRCA2P51587 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.92■□□□□ 0.94
BRCA2P51587 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRCA2P51587 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.92■□□□□ 0.94
BRCA2P51587 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
BRCA2P51587 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BRCA2P51587 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
BRCA2P51587 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRCA2P51587 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRCA2P51587 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BRCA2P51587 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.91■□□□□ 0.94
BRCA2P51587 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.91■□□□□ 0.94
BRCA2P51587 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.91■□□□□ 0.94
BRCA2P51587 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.91■□□□□ 0.94
BRCA2P51587 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRCA2P51587 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.91■□□□□ 0.94
BRCA2P51587 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
BRCA2P51587 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRCA2P51587 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
BRCA2P51587 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRCA2P51587 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRCA2P51587 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.91■□□□□ 0.94
BRCA2P51587 RN7SL606P-201ENST00000472779 293 ntBASIC20.91■□□□□ 0.94
BRCA2P51587 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.91■□□□□ 0.94
BRCA2P51587 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.91■□□□□ 0.94
BRCA2P51587 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.91■□□□□ 0.94
BRCA2P51587 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.91■□□□□ 0.94
BRCA2P51587 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.91■□□□□ 0.94
BRCA2P51587 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRCA2P51587 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
BRCA2P51587 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRCA2P51587 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.9■□□□□ 0.94
BRCA2P51587 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BRCA2P51587 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.9■□□□□ 0.94
BRCA2P51587 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.9■□□□□ 0.94
BRCA2P51587 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.9■□□□□ 0.94
BRCA2P51587 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRCA2P51587 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
BRCA2P51587 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.9■□□□□ 0.94
BRCA2P51587 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BRCA2P51587 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BRCA2P51587 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.9■□□□□ 0.94
BRCA2P51587 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRCA2P51587 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRCA2P51587 AL591424.1-201ENST00000442569 1213 ntBASIC20.9■□□□□ 0.94
BRCA2P51587 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.9■□□□□ 0.94
BRCA2P51587 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.9■□□□□ 0.94
BRCA2P51587 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.9■□□□□ 0.94
BRCA2P51587 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.9■□□□□ 0.94
BRCA2P51587 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
BRCA2P51587 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
BRCA2P51587 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.9■□□□□ 0.94
BRCA2P51587 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.9■□□□□ 0.94
BRCA2P51587 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.9■□□□□ 0.94
BRCA2P51587 GPR32P1-201ENST00000601788 811 ntBASIC20.9■□□□□ 0.94
BRCA2P51587 AC124864.1-201ENST00000623408 392 ntBASIC20.9■□□□□ 0.94
BRCA2P51587 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
BRCA2P51587 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BRCA2P51587 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.89■□□□□ 0.94
BRCA2P51587 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.89■□□□□ 0.94
BRCA2P51587 AC211486.1-202ENST00000416371 468 ntBASIC20.89■□□□□ 0.93
BRCA2P51587 HTR5BP-201ENST00000430851 1154 ntBASIC20.89■□□□□ 0.93
BRCA2P51587 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.89■□□□□ 0.93
BRCA2P51587 AC211476.1-201ENST00000503899 468 ntBASIC20.89■□□□□ 0.93
BRCA2P51587 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.89■□□□□ 0.93
BRCA2P51587 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.89■□□□□ 0.93
BRCA2P51587 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.89■□□□□ 0.93
BRCA2P51587 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
BRCA2P51587 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRCA2P51587 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRCA2P51587 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
BRCA2P51587 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.89■□□□□ 0.93
BRCA2P51587 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.89■□□□□ 0.93
BRCA2P51587 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.89■□□□□ 0.93
BRCA2P51587 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.89■□□□□ 0.93
BRCA2P51587 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
BRCA2P51587 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRCA2P51587 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
BRCA2P51587 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRCA2P51587 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.88■□□□□ 0.93
BRCA2P51587 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRCA2P51587 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
BRCA2P51587 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.88■□□□□ 0.93
BRCA2P51587 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.88■□□□□ 0.93
BRCA2P51587 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BRCA2P51587 AC093909.1-201ENST00000504731 1122 ntBASIC20.88■□□□□ 0.93
BRCA2P51587 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRCA2P51587 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.88■□□□□ 0.93
BRCA2P51587 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.88■□□□□ 0.93
BRCA2P51587 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRCA2P51587 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRCA2P51587 HLA-J-203ENST00000494367 1087 ntBASIC20.88■□□□□ 0.93
BRCA2P51587 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.88■□□□□ 0.93
BRCA2P51587 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.88■□□□□ 0.93
BRCA2P51587 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.88■□□□□ 0.93
BRCA2P51587 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRCA2P51587 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.88■□□□□ 0.93
BRCA2P51587 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BRCA2P51587 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms