Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CENPFP49454 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CENPFP49454 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CENPFP49454 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CENPFP49454 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.09■□□□□ 0.97
CENPFP49454 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.09■□□□□ 0.97
CENPFP49454 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CENPFP49454 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CENPFP49454 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.09■□□□□ 0.97
CENPFP49454 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CENPFP49454 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CENPFP49454 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CENPFP49454 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CENPFP49454 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CENPFP49454 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CENPFP49454 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.08■□□□□ 0.97
CENPFP49454 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CENPFP49454 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CENPFP49454 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
CENPFP49454 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CENPFP49454 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.08■□□□□ 0.97
CENPFP49454 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CENPFP49454 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CENPFP49454 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CENPFP49454 AC145285.3-201ENST00000564603 959 ntBASIC21.08■□□□□ 0.97
CENPFP49454 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
CENPFP49454 AC008608.2-201ENST00000606089 416 ntBASIC21.08■□□□□ 0.97
CENPFP49454 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.08■□□□□ 0.97
CENPFP49454 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CENPFP49454 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CENPFP49454 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CENPFP49454 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CENPFP49454 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CENPFP49454 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CENPFP49454 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CENPFP49454 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.08■□□□□ 0.96
CENPFP49454 AC124864.1-201ENST00000623408 392 ntBASIC21.08■□□□□ 0.96
CENPFP49454 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CENPFP49454 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.07■□□□□ 0.96
CENPFP49454 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.07■□□□□ 0.96
CENPFP49454 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CENPFP49454 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CENPFP49454 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.07■□□□□ 0.96
CENPFP49454 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.07■□□□□ 0.96
CENPFP49454 RFPL4AP1-201ENST00000530883 850 ntBASIC21.07■□□□□ 0.96
CENPFP49454 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.07■□□□□ 0.96
CENPFP49454 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.07■□□□□ 0.96
CENPFP49454 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.07■□□□□ 0.96
CENPFP49454 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CENPFP49454 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CENPFP49454 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CENPFP49454 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CENPFP49454 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CENPFP49454 FAM197Y3-203ENST00000618346 717 ntBASIC21.07■□□□□ 0.96
CENPFP49454 FAM215A-202ENST00000632077 792 ntBASIC21.07■□□□□ 0.96
CENPFP49454 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CENPFP49454 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CENPFP49454 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.07■□□□□ 0.96
CENPFP49454 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.06■□□□□ 0.96
CENPFP49454 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CENPFP49454 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.06■□□□□ 0.96
CENPFP49454 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CENPFP49454 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CENPFP49454 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CENPFP49454 MED15P5-201ENST00000423150 992 ntBASIC21.06■□□□□ 0.96
CENPFP49454 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.06■□□□□ 0.96
CENPFP49454 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CENPFP49454 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.06■□□□□ 0.96
CENPFP49454 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CENPFP49454 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CENPFP49454 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
CENPFP49454 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CENPFP49454 IGHGP-201ENST00000390555 1178 ntBASIC21.06■□□□□ 0.96
CENPFP49454 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.06■□□□□ 0.96
CENPFP49454 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.06■□□□□ 0.96
CENPFP49454 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CENPFP49454 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CENPFP49454 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.06■□□□□ 0.96
CENPFP49454 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.06■□□□□ 0.96
CENPFP49454 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CENPFP49454 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CENPFP49454 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CENPFP49454 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CENPFP49454 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CENPFP49454 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.06■□□□□ 0.96
CENPFP49454 MINOS1P3-201ENST00000457048 203 ntBASIC21.06■□□□□ 0.96
CENPFP49454 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.06■□□□□ 0.96
CENPFP49454 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC21.06■□□□□ 0.96
CENPFP49454 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CENPFP49454 LINC01006-201ENST00000333319 2292 ntBASIC21.06■□□□□ 0.96
CENPFP49454 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CENPFP49454 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.06■□□□□ 0.96
CENPFP49454 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CENPFP49454 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CENPFP49454 AC004967.1-201ENST00000453589 447 ntBASIC21.05■□□□□ 0.96
CENPFP49454 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.05■□□□□ 0.96
CENPFP49454 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.05■□□□□ 0.96
CENPFP49454 GPR32P1-201ENST00000601788 811 ntBASIC21.05■□□□□ 0.96
CENPFP49454 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CENPFP49454 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms