Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 UNC93B2-201ENST00000285383 730 ntBASIC19.73■□□□□ 0.75
RFC1P35251 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.73■□□□□ 0.75
RFC1P35251 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.73■□□□□ 0.75
RFC1P35251 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RFC1P35251 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RFC1P35251 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.73■□□□□ 0.75
RFC1P35251 AP005242.2-201ENST00000580065 1175 ntBASIC19.73■□□□□ 0.75
RFC1P35251 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.73■□□□□ 0.75
RFC1P35251 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
RFC1P35251 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RFC1P35251 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.73■□□□□ 0.75
RFC1P35251 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
RFC1P35251 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFC1P35251 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.72■□□□□ 0.75
RFC1P35251 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC1P35251 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC1P35251 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC1P35251 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC1P35251 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RFC1P35251 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC1P35251 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC1P35251 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFC1P35251 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC1P35251 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC1P35251 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RFC1P35251 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.72■□□□□ 0.75
RFC1P35251 TSPY15P-201ENST00000457163 923 ntBASIC19.72■□□□□ 0.75
RFC1P35251 AL355075.4-201ENST00000554988 638 ntBASIC19.72■□□□□ 0.75
RFC1P35251 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.72■□□□□ 0.75
RFC1P35251 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.72■□□□□ 0.75
RFC1P35251 AP000525.1-201ENST00000608286 694 ntBASIC19.72■□□□□ 0.75
RFC1P35251 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RFC1P35251 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.72■□□□□ 0.75
RFC1P35251 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.72■□□□□ 0.75
RFC1P35251 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.72■□□□□ 0.75
RFC1P35251 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.72■□□□□ 0.75
RFC1P35251 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC1P35251 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RFC1P35251 KRT17P2-201ENST00000300992 1314 ntBASIC19.72■□□□□ 0.75
RFC1P35251 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC1P35251 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC1P35251 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.72■□□□□ 0.75
RFC1P35251 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFC1P35251 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFC1P35251 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC1P35251 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.71■□□□□ 0.75
RFC1P35251 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.71■□□□□ 0.75
RFC1P35251 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFC1P35251 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC1P35251 RCC2P3-201ENST00000418112 1537 ntBASIC19.71■□□□□ 0.75
RFC1P35251 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
RFC1P35251 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC1P35251 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RFC1P35251 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.71■□□□□ 0.75
RFC1P35251 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC1P35251 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.71■□□□□ 0.75
RFC1P35251 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RFC1P35251 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC1P35251 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RFC1P35251 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.71■□□□□ 0.75
RFC1P35251 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC1P35251 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.71■□□□□ 0.75
RFC1P35251 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.71■□□□□ 0.75
RFC1P35251 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.71■□□□□ 0.75
RFC1P35251 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.71■□□□□ 0.75
RFC1P35251 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC1P35251 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC1P35251 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFC1P35251 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFC1P35251 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC1P35251 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC1P35251 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
RFC1P35251 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC1P35251 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC1P35251 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFC1P35251 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RFC1P35251 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC1P35251 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
RFC1P35251 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.7■□□□□ 0.74
RFC1P35251 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC1P35251 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC1P35251 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC1P35251 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.7■□□□□ 0.74
RFC1P35251 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC1P35251 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.7■□□□□ 0.74
RFC1P35251 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC1P35251 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC1P35251 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC1P35251 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFC1P35251 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms