Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC32.74■■■□□ 2.83
TOP2AP11388 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC32.74■■■□□ 2.83
TOP2AP11388 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
TOP2AP11388 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
TOP2AP11388 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC32.74■■■□□ 2.83
TOP2AP11388 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC32.74■■■□□ 2.83
TOP2AP11388 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
TOP2AP11388 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
TOP2AP11388 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC32.74■■■□□ 2.83
TOP2AP11388 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC32.73■■■□□ 2.83
TOP2AP11388 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
TOP2AP11388 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC32.73■■■□□ 2.83
TOP2AP11388 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
TOP2AP11388 AC079776.4-201ENST00000511039 504 ntBASIC32.73■■■□□ 2.83
TOP2AP11388 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC32.73■■■□□ 2.83
TOP2AP11388 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC32.73■■■□□ 2.83
TOP2AP11388 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
TOP2AP11388 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
TOP2AP11388 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
TOP2AP11388 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC32.72■■■□□ 2.83
TOP2AP11388 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC32.72■■■□□ 2.83
TOP2AP11388 KRT18P67-201ENST00000432816 1264 ntBASIC32.72■■■□□ 2.83
TOP2AP11388 AC114341.1-201ENST00000618070 349 ntBASIC32.72■■■□□ 2.83
TOP2AP11388 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC32.72■■■□□ 2.83
TOP2AP11388 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
TOP2AP11388 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC32.72■■■□□ 2.83
TOP2AP11388 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC32.72■■■□□ 2.83
TOP2AP11388 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
TOP2AP11388 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
TOP2AP11388 CCS-201ENST00000310190 942 ntTSL 5 BASIC32.72■■■□□ 2.83
TOP2AP11388 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
TOP2AP11388 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC32.72■■■□□ 2.83
TOP2AP11388 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC32.72■■■□□ 2.83
TOP2AP11388 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC32.72■■■□□ 2.83
TOP2AP11388 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
TOP2AP11388 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
TOP2AP11388 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC32.71■■■□□ 2.83
TOP2AP11388 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
TOP2AP11388 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC32.71■■■□□ 2.83
TOP2AP11388 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
TOP2AP11388 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
TOP2AP11388 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
TOP2AP11388 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
TOP2AP11388 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC32.71■■■□□ 2.83
TOP2AP11388 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
TOP2AP11388 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC32.71■■■□□ 2.83
TOP2AP11388 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC32.71■■■□□ 2.83
TOP2AP11388 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC32.7■■■□□ 2.83
TOP2AP11388 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC32.7■■■□□ 2.83
TOP2AP11388 AC243591.1-201ENST00000452967 1364 ntBASIC32.7■■■□□ 2.83
TOP2AP11388 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
TOP2AP11388 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC32.7■■■□□ 2.83
TOP2AP11388 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC32.7■■■□□ 2.83
TOP2AP11388 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC32.7■■■□□ 2.83
TOP2AP11388 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC32.7■■■□□ 2.83
TOP2AP11388 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC32.7■■■□□ 2.82
TOP2AP11388 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC32.7■■■□□ 2.82
TOP2AP11388 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
TOP2AP11388 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
TOP2AP11388 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
TOP2AP11388 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC32.69■■■□□ 2.82
TOP2AP11388 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
TOP2AP11388 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
TOP2AP11388 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC32.69■■■□□ 2.82
TOP2AP11388 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC32.68■■■□□ 2.82
TOP2AP11388 LINC01521-201ENST00000504184 1943 ntBASIC32.68■■■□□ 2.82
TOP2AP11388 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
TOP2AP11388 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC32.68■■■□□ 2.82
TOP2AP11388 AC096582.2-201ENST00000510860 516 ntBASIC32.68■■■□□ 2.82
TOP2AP11388 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC32.68■■■□□ 2.82
TOP2AP11388 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
TOP2AP11388 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
TOP2AP11388 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
TOP2AP11388 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC32.68■■■□□ 2.82
TOP2AP11388 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC32.68■■■□□ 2.82
TOP2AP11388 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
TOP2AP11388 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
TOP2AP11388 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC32.67■■■□□ 2.82
TOP2AP11388 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
TOP2AP11388 DDT-203ENST00000403754 569 ntTSL 3 BASIC32.67■■■□□ 2.82
TOP2AP11388 AL590627.1-203ENST00000421194 1026 ntBASIC32.67■■■□□ 2.82
TOP2AP11388 DDT-206ENST00000430101 573 ntTSL 2 BASIC32.67■■■□□ 2.82
TOP2AP11388 AC113404.2-201ENST00000507884 177 ntBASIC32.67■■■□□ 2.82
TOP2AP11388 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
TOP2AP11388 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC32.67■■■□□ 2.82
TOP2AP11388 AC148477.8-201ENST00000624298 468 ntBASIC32.67■■■□□ 2.82
TOP2AP11388 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
TOP2AP11388 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
TOP2AP11388 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC32.67■■■□□ 2.82
TOP2AP11388 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
TOP2AP11388 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC32.67■■■□□ 2.82
TOP2AP11388 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
TOP2AP11388 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC32.67■■■□□ 2.82
TOP2AP11388 TLE1-202ENST00000376484 666 ntTSL 3 BASIC32.67■■■□□ 2.82
TOP2AP11388 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC32.67■■■□□ 2.82
TOP2AP11388 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC32.67■■■□□ 2.82
TOP2AP11388 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC32.67■■■□□ 2.82
TOP2AP11388 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC32.66■■■□□ 2.82
TOP2AP11388 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
TOP2AP11388 POLI-202ENST00000406285 2030 ntTSL 2 BASIC32.65■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms