Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTSBP07858 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTSBP07858 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.73■□□□□ 0.43
CTSBP07858 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CTSBP07858 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
CTSBP07858 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTSBP07858 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTSBP07858 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTSBP07858 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTSBP07858 Z98044.1-201ENST00000632503 1764 ntBASIC17.73■□□□□ 0.43
CTSBP07858 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.73■□□□□ 0.43
CTSBP07858 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTSBP07858 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTSBP07858 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CTSBP07858 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.72■□□□□ 0.43
CTSBP07858 LINC01311-201ENST00000565162 1445 ntBASIC17.72■□□□□ 0.43
CTSBP07858 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CTSBP07858 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTSBP07858 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.72■□□□□ 0.43
CTSBP07858 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CTSBP07858 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTSBP07858 AL499627.1-201ENST00000569373 2188 ntBASIC17.72■□□□□ 0.43
CTSBP07858 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTSBP07858 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTSBP07858 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTSBP07858 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CTSBP07858 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CTSBP07858 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTSBP07858 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTSBP07858 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTSBP07858 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTSBP07858 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CTSBP07858 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.72■□□□□ 0.43
CTSBP07858 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.72■□□□□ 0.43
CTSBP07858 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTSBP07858 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.72■□□□□ 0.43
CTSBP07858 VENTXP5-201ENST00000523979 775 ntBASIC17.72■□□□□ 0.43
CTSBP07858 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.72■□□□□ 0.43
CTSBP07858 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.72■□□□□ 0.43
CTSBP07858 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.72■□□□□ 0.43
CTSBP07858 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CTSBP07858 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.72■□□□□ 0.43
CTSBP07858 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.72■□□□□ 0.43
CTSBP07858 AC083906.6-201ENST00000641366 219 ntBASIC17.72■□□□□ 0.43
CTSBP07858 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
CTSBP07858 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CTSBP07858 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTSBP07858 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CTSBP07858 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTSBP07858 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CTSBP07858 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTSBP07858 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTSBP07858 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTSBP07858 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTSBP07858 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.72■□□□□ 0.43
CTSBP07858 AC005332.1-201ENST00000577698 1310 ntBASIC17.72■□□□□ 0.43
CTSBP07858 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.72■□□□□ 0.43
CTSBP07858 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.71■□□□□ 0.43
CTSBP07858 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.71■□□□□ 0.43
CTSBP07858 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTSBP07858 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.71■□□□□ 0.43
CTSBP07858 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CTSBP07858 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.71■□□□□ 0.43
CTSBP07858 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTSBP07858 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTSBP07858 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CTSBP07858 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CTSBP07858 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTSBP07858 HBZP1-201ENST00000354915 429 ntBASIC17.71■□□□□ 0.43
CTSBP07858 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.71■□□□□ 0.43
CTSBP07858 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.71■□□□□ 0.43
CTSBP07858 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.71■□□□□ 0.43
CTSBP07858 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.71■□□□□ 0.43
CTSBP07858 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.71■□□□□ 0.43
CTSBP07858 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.71■□□□□ 0.43
CTSBP07858 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.71■□□□□ 0.43
CTSBP07858 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTSBP07858 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CTSBP07858 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTSBP07858 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTSBP07858 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.71■□□□□ 0.43
CTSBP07858 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTSBP07858 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CTSBP07858 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CTSBP07858 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.71■□□□□ 0.42
CTSBP07858 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSBP07858 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSBP07858 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSBP07858 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTSBP07858 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSBP07858 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSBP07858 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTSBP07858 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.7■□□□□ 0.42
CTSBP07858 AC034236.2-201ENST00000606662 1610 ntBASIC17.7■□□□□ 0.42
CTSBP07858 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTSBP07858 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTSBP07858 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CTSBP07858 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTSBP07858 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSBP07858 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms