Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
GMDSO60547 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.57■□□□□ 0.24
GMDSO60547 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
GMDSO60547 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GMDSO60547 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GMDSO60547 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
GMDSO60547 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GMDSO60547 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GMDSO60547 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GMDSO60547 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
GMDSO60547 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
GMDSO60547 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GMDSO60547 Z98044.1-201ENST00000632503 1764 ntBASIC16.56■□□□□ 0.24
GMDSO60547 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.56■□□□□ 0.24
GMDSO60547 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.56■□□□□ 0.24
GMDSO60547 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GMDSO60547 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.56■□□□□ 0.24
GMDSO60547 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GMDSO60547 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GMDSO60547 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GMDSO60547 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.56■□□□□ 0.24
GMDSO60547 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
GMDSO60547 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GMDSO60547 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
GMDSO60547 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.56■□□□□ 0.24
GMDSO60547 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GMDSO60547 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.56■□□□□ 0.24
GMDSO60547 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
GMDSO60547 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.56■□□□□ 0.24
GMDSO60547 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
GMDSO60547 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.56■□□□□ 0.24
GMDSO60547 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.56■□□□□ 0.24
GMDSO60547 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GMDSO60547 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
GMDSO60547 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.56■□□□□ 0.24
GMDSO60547 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
GMDSO60547 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
GMDSO60547 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GMDSO60547 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GMDSO60547 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GMDSO60547 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
GMDSO60547 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.56■□□□□ 0.24
GMDSO60547 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.56■□□□□ 0.24
GMDSO60547 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GMDSO60547 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 AC093525.10-201ENST00000625130 1569 ntBASIC16.55■□□□□ 0.24
GMDSO60547 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
GMDSO60547 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.55■□□□□ 0.24
GMDSO60547 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.55■□□□□ 0.24
GMDSO60547 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
GMDSO60547 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
GMDSO60547 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
GMDSO60547 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.55■□□□□ 0.24
GMDSO60547 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.55■□□□□ 0.24
GMDSO60547 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.55■□□□□ 0.24
GMDSO60547 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
GMDSO60547 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
GMDSO60547 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.55■□□□□ 0.24
GMDSO60547 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.55■□□□□ 0.24
GMDSO60547 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.55■□□□□ 0.24
GMDSO60547 C1QL1P1-201ENST00000568105 661 ntBASIC16.55■□□□□ 0.24
GMDSO60547 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
GMDSO60547 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.55■□□□□ 0.24
GMDSO60547 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.55■□□□□ 0.24
GMDSO60547 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GMDSO60547 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
GMDSO60547 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GMDSO60547 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GMDSO60547 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
GMDSO60547 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GMDSO60547 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
GMDSO60547 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
GMDSO60547 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GMDSO60547 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
GMDSO60547 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.54■□□□□ 0.24
GMDSO60547 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GMDSO60547 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
GMDSO60547 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.54■□□□□ 0.24
GMDSO60547 FAM197Y4-202ENST00000622692 608 ntBASIC16.54■□□□□ 0.24
GMDSO60547 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.54■□□□□ 0.24
GMDSO60547 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
GMDSO60547 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms