Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.3■□□□□ 0.52
C4orf47A7E2U8 AC104417.2-201ENST00000562989 1793 ntBASIC18.3■□□□□ 0.52
C4orf47A7E2U8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.29■□□□□ 0.52
C4orf47A7E2U8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 FAM197Y8-203ENST00000450145 560 ntBASIC18.29■□□□□ 0.52
C4orf47A7E2U8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 POLD2P1-201ENST00000511220 997 ntBASIC18.29■□□□□ 0.52
C4orf47A7E2U8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 AL390719.2-201ENST00000606993 987 ntBASIC18.29■□□□□ 0.52
C4orf47A7E2U8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 AC099778.1-201ENST00000568593 1911 ntBASIC18.29■□□□□ 0.52
C4orf47A7E2U8 AC009237.14-201ENST00000609975 1594 ntBASIC18.29■□□□□ 0.52
C4orf47A7E2U8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
C4orf47A7E2U8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C4orf47A7E2U8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 NUS1P2-201ENST00000417358 873 ntBASIC18.27■□□□□ 0.52
C4orf47A7E2U8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.27■□□□□ 0.52
C4orf47A7E2U8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C4orf47A7E2U8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
C4orf47A7E2U8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
C4orf47A7E2U8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
C4orf47A7E2U8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.27■□□□□ 0.51
C4orf47A7E2U8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
C4orf47A7E2U8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms