Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 AC010240.3-201ENST00000607688 395 ntBASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TBC1D3BA6NDS4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 AC141586.3-201ENST00000562166 1838 ntBASIC19■□□□□ 0.63
TBC1D3BA6NDS4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 BID-204ENST00000399767 2129 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 MIR662-201ENST00000384847 95 ntBASIC19■□□□□ 0.63
TBC1D3BA6NDS4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 KRT8P26-201ENST00000534154 1276 ntBASIC19■□□□□ 0.63
TBC1D3BA6NDS4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 AL691432.3-201ENST00000621860 400 ntBASIC19■□□□□ 0.63
TBC1D3BA6NDS4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19■□□□□ 0.63
TBC1D3BA6NDS4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 TPM4P1-201ENST00000436100 807 ntBASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 AC034236.2-201ENST00000606662 1610 ntBASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TBC1D3BA6NDS4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 TSPY22P-201ENST00000427496 604 ntBASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 PRELID1P1-202ENST00000567272 903 ntBASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TBC1D3BA6NDS4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms