Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 AC006333.2-201ENST00000607957 2099 ntBASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 AL031284.1-201ENST00000419297 478 ntBASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC163A0A0D9SF12 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 TCF3P1-201ENST00000423021 1937 ntBASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC163A0A0D9SF12 Z82202.1-201ENST00000623446 1880 ntBASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 AC106730.1-201ENST00000566722 1090 ntBASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 AL591684.3-201ENST00000605187 298 ntBASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC163A0A0D9SF12 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 MIR5100-201ENST00000579544 119 ntBASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 TEX21P-204ENST00000641479 1693 ntBASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC163A0A0D9SF12 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC163A0A0D9SF12 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms