Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 PGM5P4-201ENST00000421970 445 ntBASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 PTBP1P-201ENST00000554374 1601 ntBASIC14.23□□□□□ -0.13
TRAPPC1Q9Y5R8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 ZNF815P-204ENST00000434898 1737 ntBASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 TSPY9P-201ENST00000440215 945 ntBASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 TSPY11P-201ENST00000442607 1045 ntBASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 AL031963.3-201ENST00000606441 850 ntBASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 MIR6724-1-201ENST00000616420 92 ntBASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 MIR6724-2-201ENST00000616483 92 ntBASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 MIR6724-4-201ENST00000617390 92 ntBASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 MIR6724-3-201ENST00000622482 92 ntBASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 AC083906.6-201ENST00000641366 219 ntBASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 KRT8P20-201ENST00000423953 1409 ntBASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAPPC1Q9Y5R8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms