Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.62■■□□□ 1.37
RTCBQ9Y3I0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RTCBQ9Y3I0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RTCBQ9Y3I0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC23.62■■□□□ 1.37
RTCBQ9Y3I0 SLC25A1P1-201ENST00000528351 927 ntBASIC23.62■■□□□ 1.37
RTCBQ9Y3I0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC23.62■■□□□ 1.37
RTCBQ9Y3I0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC23.62■■□□□ 1.37
RTCBQ9Y3I0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RTCBQ9Y3I0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
RTCBQ9Y3I0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 POM121L3P-201ENST00000419331 1163 ntBASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 AC011840.4-201ENST00000578471 627 ntBASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.61■■□□□ 1.37
RTCBQ9Y3I0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTCBQ9Y3I0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 CYP51A1P1-201ENST00000492267 1507 ntBASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 EMD-201ENST00000369835 966 ntTSL 3 BASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 AL031284.1-201ENST00000419297 478 ntBASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.59■■□□□ 1.37
RTCBQ9Y3I0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
RTCBQ9Y3I0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RTCBQ9Y3I0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC23.58■■□□□ 1.37
RTCBQ9Y3I0 KRT89P-201ENST00000620027 1478 ntBASIC23.58■■□□□ 1.37
RTCBQ9Y3I0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.37
RTCBQ9Y3I0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
RTCBQ9Y3I0 MED22-202ENST00000371999 987 ntTSL 3 BASIC23.58■■□□□ 1.37
RTCBQ9Y3I0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RTCBQ9Y3I0 KRT18P67-201ENST00000432816 1264 ntBASIC23.58■■□□□ 1.37
RTCBQ9Y3I0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC23.58■■□□□ 1.37
RTCBQ9Y3I0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC23.58■■□□□ 1.37
RTCBQ9Y3I0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
RTCBQ9Y3I0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
RTCBQ9Y3I0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RTCBQ9Y3I0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
RTCBQ9Y3I0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
RTCBQ9Y3I0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
RTCBQ9Y3I0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
RTCBQ9Y3I0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.57■■□□□ 1.36
RTCBQ9Y3I0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.57■■□□□ 1.36
RTCBQ9Y3I0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTCBQ9Y3I0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTCBQ9Y3I0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTCBQ9Y3I0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
RTCBQ9Y3I0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTCBQ9Y3I0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
RTCBQ9Y3I0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
RTCBQ9Y3I0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTCBQ9Y3I0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
RTCBQ9Y3I0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTCBQ9Y3I0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23.57■■□□□ 1.36
RTCBQ9Y3I0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms