Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ECHDC1Q9NTX5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.81■■□□□ 1.24
ECHDC1Q9NTX5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
ECHDC1Q9NTX5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.81■■□□□ 1.24
ECHDC1Q9NTX5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
ECHDC1Q9NTX5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
ECHDC1Q9NTX5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC22.81■■□□□ 1.24
ECHDC1Q9NTX5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.81■■□□□ 1.24
ECHDC1Q9NTX5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.81■■□□□ 1.24
ECHDC1Q9NTX5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.81■■□□□ 1.24
ECHDC1Q9NTX5 AL499627.1-201ENST00000569373 2188 ntBASIC22.81■■□□□ 1.24
ECHDC1Q9NTX5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
ECHDC1Q9NTX5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.81■■□□□ 1.24
ECHDC1Q9NTX5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.81■■□□□ 1.24
ECHDC1Q9NTX5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ECHDC1Q9NTX5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 AC034236.2-201ENST00000606662 1610 ntBASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 ECEL1P3-201ENST00000427961 737 ntBASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 AC010203.1-204ENST00000548782 407 ntBASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 AL512604.3-201ENST00000569583 964 ntBASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 AC005363.2-201ENST00000618631 242 ntBASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 AL138966.2-201ENST00000621997 464 ntBASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
ECHDC1Q9NTX5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ECHDC1Q9NTX5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ECHDC1Q9NTX5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.79■■□□□ 1.24
ECHDC1Q9NTX5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ECHDC1Q9NTX5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ECHDC1Q9NTX5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ECHDC1Q9NTX5 AC113347.1-201ENST00000413321 391 ntBASIC22.79■■□□□ 1.24
ECHDC1Q9NTX5 KRT18P41-201ENST00000518924 1277 ntBASIC22.79■■□□□ 1.24
ECHDC1Q9NTX5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.79■■□□□ 1.24
ECHDC1Q9NTX5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.79■■□□□ 1.24
ECHDC1Q9NTX5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.79■■□□□ 1.24
ECHDC1Q9NTX5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.79■■□□□ 1.24
ECHDC1Q9NTX5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.79■■□□□ 1.24
ECHDC1Q9NTX5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ECHDC1Q9NTX5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ECHDC1Q9NTX5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
ECHDC1Q9NTX5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
ECHDC1Q9NTX5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 AC009947.2-201ENST00000444014 672 ntBASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
ECHDC1Q9NTX5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
ECHDC1Q9NTX5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
ECHDC1Q9NTX5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
ECHDC1Q9NTX5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
ECHDC1Q9NTX5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms