Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 MIR564-202ENST00000385049 94 ntBASIC18.79■□□□□ 0.6
CHRDQ9H2X0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 AL773604.1-201ENST00000617417 272 ntBASIC18.79■□□□□ 0.6
CHRDQ9H2X0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRDQ9H2X0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 AP005901.3-202ENST00000581653 237 ntBASIC18.78■□□□□ 0.6
CHRDQ9H2X0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHRDQ9H2X0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.77■□□□□ 0.6
CHRDQ9H2X0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 AC024563.2-201ENST00000603282 481 ntBASIC18.77■□□□□ 0.6
CHRDQ9H2X0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.77■□□□□ 0.6
CHRDQ9H2X0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHRDQ9H2X0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CHRDQ9H2X0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 SLC25A1P1-201ENST00000528351 927 ntBASIC18.76■□□□□ 0.59
CHRDQ9H2X0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CHRDQ9H2X0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRDQ9H2X0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHRDQ9H2X0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRDQ9H2X0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRDQ9H2X0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRDQ9H2X0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHRDQ9H2X0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHRDQ9H2X0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.75■□□□□ 0.59
CHRDQ9H2X0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CHRDQ9H2X0 FAM197Y8-203ENST00000450145 560 ntBASIC18.75■□□□□ 0.59
CHRDQ9H2X0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.75■□□□□ 0.59
CHRDQ9H2X0 KRT18P58-201ENST00000527480 1120 ntBASIC18.75■□□□□ 0.59
CHRDQ9H2X0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.75■□□□□ 0.59
CHRDQ9H2X0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.75■□□□□ 0.59
CHRDQ9H2X0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms