Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 AL158047.1-201ENST00000445918 881 ntBASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 AC011298.2-201ENST00000617989 482 ntBASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 AC083906.6-201ENST00000641366 219 ntBASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 Z98044.1-201ENST00000632503 1764 ntBASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC68Q9H2F9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 UBE2SP1-201ENST00000450587 669 ntBASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 AC091390.4-202ENST00000476426 537 ntBASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC68Q9H2F9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 AL138781.2-201ENST00000617896 1843 ntBASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 AC005082.1-201ENST00000413042 2259 ntBASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 AC093525.10-201ENST00000625130 1569 ntBASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC68Q9H2F9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 FAM207BP-201ENST00000447172 505 ntBASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.78■□□□□ 0.6
CCDC68Q9H2F9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms