Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNTNAP3Q9BZ76 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNTNAP3Q9BZ76 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNTNAP3Q9BZ76 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.84■□□□□ 0.45
CNTNAP3Q9BZ76 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CNTNAP3Q9BZ76 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CNTNAP3Q9BZ76 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNTNAP3Q9BZ76 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNTNAP3Q9BZ76 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CNTNAP3Q9BZ76 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.83■□□□□ 0.45
CNTNAP3Q9BZ76 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNTNAP3Q9BZ76 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CNTNAP3Q9BZ76 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNTNAP3Q9BZ76 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CNTNAP3Q9BZ76 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CNTNAP3Q9BZ76 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNTNAP3Q9BZ76 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNTNAP3Q9BZ76 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CNTNAP3Q9BZ76 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.83■□□□□ 0.44
CNTNAP3Q9BZ76 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNTNAP3Q9BZ76 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.83■□□□□ 0.44
CNTNAP3Q9BZ76 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.83■□□□□ 0.44
CNTNAP3Q9BZ76 AC138761.1-201ENST00000584393 385 ntBASIC17.83■□□□□ 0.44
CNTNAP3Q9BZ76 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNTNAP3Q9BZ76 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CNTNAP3Q9BZ76 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.83■□□□□ 0.44
CNTNAP3Q9BZ76 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNTNAP3Q9BZ76 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.83■□□□□ 0.44
CNTNAP3Q9BZ76 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.83■□□□□ 0.44
CNTNAP3Q9BZ76 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNTNAP3Q9BZ76 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNTNAP3Q9BZ76 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 Z98882.1-201ENST00000622160 2253 ntBASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 BCRP1-201ENST00000444246 691 ntBASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 AL157888.1-201ENST00000631930 593 ntBASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.82■□□□□ 0.44
CNTNAP3Q9BZ76 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 RPS2P1-201ENST00000434010 821 ntBASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 AC002347.1-201ENST00000569543 541 ntBASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 AC005332.3-201ENST00000589904 676 ntBASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 AL591684.3-201ENST00000605187 298 ntBASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 AL096865.1-201ENST00000606796 927 ntBASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CNTNAP3Q9BZ76 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 FEM1AP4-201ENST00000443167 1987 ntBASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CNTNAP3Q9BZ76 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms