Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 OFD1P8Y-201ENST00000449148 1433 ntBASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 LINC01815-202ENST00000641468 1409 ntBASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 MOSPD1-202ENST00000370779 773 ntTSL 2 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 ZFAND6P1-201ENST00000434138 605 ntBASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 AC022398.1-201ENST00000441001 510 ntTSL 5 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 AL662890.2-201ENST00000457253 709 ntTSL 3 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 RBBP4P1-201ENST00000502424 1276 ntBASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 AC137579.1-201ENST00000519978 836 ntTSL 3 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 AHI1-217ENST00000534469 680 ntTSL 3 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 UBE2N-206ENST00000552442 607 ntTSL 5 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 AC090607.3-201ENST00000559954 388 ntTSL 2 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 AP002906.1-201ENST00000603405 233 ntBASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 AL627230.4-201ENST00000617851 370 ntBASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 AC105105.5-201ENST00000622635 1294 ntBASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 RBFOX2-203ENST00000397303 1354 ntTSL 5 BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
KRTAP3-3Q9BYR6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 Y_RNA.6-201ENST00000362350 114 ntBASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 RNU6-1257P-201ENST00000384625 110 ntBASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 RNU6-114P-201ENST00000384704 105 ntBASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 MRPL50P1-201ENST00000431951 384 ntBASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 RN7SL767P-201ENST00000493013 295 ntBASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 PCBP1-AS1-260ENST00000602091 959 ntTSL 5 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 AL021328.1-201ENST00000602674 1291 ntTSL 2 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 AC005776.1-201ENST00000603164 290 ntBASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 AC099654.5-201ENST00000636479 350 ntBASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 AC068137.3-201ENST00000639191 341 ntBASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 AC073869.6-201ENST00000640656 341 ntBASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
KRTAP3-3Q9BYR6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms